Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 0.0e+00 1097.8 549 100.0
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.1e-250 869.8 536 81.2
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 3.7e-241 838.2 548 77.9
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 3.1e-232 808.5 538 74.9
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 2.0e-231 805.8 531 76.1
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 2.2e-230 802.4 542 75.5
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 2.1e-228 795.8 552 73.7
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 4.6e-228 794.7 532 74.6
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.0e-227 793.5 532 74.2
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 2.5e-226 788.9 532 74.6
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 2.5e-226 788.9 532 74.4
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 4.8e-225 784.6 535 74.2
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 1.1e-224 783.5 531 75.0
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 4.1e-224 781.6 543 74.0
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 5.3e-224 781.2 535 74.2
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 1.2e-223 780.0 532 74.6
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 1.5e-223 779.6 532 73.5
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 2.0e-223 779.2 530 74.3
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 2.6e-223 778.9 533 72.6
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.5e-223 778.1 533 72.6
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 5.9e-223 777.7 535 74.0
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 5.9e-223 777.7 536 73.7
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 5.0e-222 774.6 531 72.5
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 8.5e-222 773.9 534 72.7
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 8.5e-222 773.9 535 72.1
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 7.2e-221 770.8 528 71.8
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 6.1e-220 767.7 551 69.9
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 1.4e-219 766.5 543 71.6
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 1.4e-219 766.5 532 73.7
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 2.3e-219 765.8 553 70.0
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 1.3e-217 760.0 532 71.2
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 2.2e-217 759.2 529 72.0
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 3.7e-217 758.4 528 71.0
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 7.0e-216 754.2 530 72.1
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 3.4e-215 751.9 532 70.9
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 3.4e-215 751.9 532 71.1
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 7.7e-215 750.7 545 69.5
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.7e-214 749.6 552 69.4
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 1.6e-212 743.0 541 68.6
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 8.0e-212 740.7 548 69.0
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 3.0e-211 738.8 549 68.7
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 2.6e-210 735.7 550 67.3
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 7.4e-210 734.2 544 69.3
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.3e-209 733.4 538 68.4
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 6.3e-209 731.1 532 70.5
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 1.1e-208 730.3 528 69.1
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 1.8e-208 729.6 536 67.9
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 5.3e-208 728.0 529 69.8
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 8.5e-206 720.7 532 69.0
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 2.5e-205 719.2 531 68.2
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 2.1e-204 716.1 464 76.5
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 8.0e-204 714.1 531 67.6
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 8.0e-204 714.1 529 69.4
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 1.2e-202 710.3 532 67.3
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 5.7e-202 708.0 579 65.1
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 1.8e-200 703.0 537 67.2
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 1.8e-200 703.0 537 66.7
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 3.1e-200 702.2 590 61.9
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 3.1e-200 702.2 529 67.5
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 4.1e-200 701.8 531 67.2
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 4.1e-200 701.8 539 66.8
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 1.6e-199 699.9 539 66.8
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 5.9e-199 698.0 536 65.3
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 7.7e-199 697.6 537 65.9
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 3.2e-197 692.2 536 65.7
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 4.7e-196 688.3 535 68.0
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 4.7e-196 688.3 537 65.7
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 2.3e-195 686.0 531 65.9
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 1.2e-191 673.7 535 64.1
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 2.9e-190 669.1 584 61.8
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 1.1e-189 667.2 531 64.2
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 2.3e-187 659.4 546 62.3
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 1.2e-186 657.1 499 68.5
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.5e-186 656.8 502 65.3
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 9.8e-186 654.1 546 63.6
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 3.7e-185 652.1 554 62.3
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 7.0e-184 647.9 535 61.9
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 4.5e-183 645.2 437 73.2
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 2.3e-182 642.9 448 72.3
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 6.8e-179 631.3 533 61.0
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 2.0e-178 629.8 531 61.2
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.2e-172 610.5 531 59.5
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 1.8e-171 606.7 539 59.4
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 2.0e-170 603.2 539 59.0
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 1.7e-169 600.1 539 59.0
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 1.1e-168 597.4 572 58.2
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 2.7e-167 592.8 537 58.3
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 2.1e-164 583.2 539 58.1
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 2.9e-161 572.8 539 57.3
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.1e-160 570.9 422 66.8
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 9.2e-160 567.8 395 68.1
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 3.5e-159 565.8 397 70.0
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 3.9e-158 562.4 538 56.7
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.4e-136 490.0 542 49.1
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 7.1e-136 488.4 528 47.9
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 2.7e-135 486.5 541 47.7
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 6.7e-126 455.3 350 66.0
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 2.5e-125 453.4 350 65.7
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 1.5e-122 444.1 288 78.1
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 1.6e-119 434.1 497 48.7
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 4.3e-109 399.4 290 70.3
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 3.7e-108 396.4 556 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 5.5e-104 382.5 480 44.8
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 1.3e-97 361.3 557 39.5
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 9.4e-88 328.6 287 62.0
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 2.2e-84 317.4 379 47.8
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 7.2e-80 302.4 205 74.6
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.4e-78 298.1 212 67.9
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 3.6e-71 273.5 562 34.2
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 8.0e-71 272.3 583 32.4
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 3.2e-59 233.8 190 64.7
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 5.0e-57 226.5 531 32.0
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 1.2e-53 215.3 151 69.5
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 4.4e-53 213.4 130 81.5
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 4.4e-53 213.4 135 78.5
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 1.2e-47 195.3 168 56.0
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 1.4e-46 191.8 143 68.5
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 3.1e-38 164.1 123 65.9
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 5.2e-38 163.3 113 75.2
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.7e-33 148.3 99 76.8
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 5.3e-30 136.7 85 81.2
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 3.4e-29 134.0 100 67.0
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 4.5e-21 107.1 458 26.0
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 7.1e-19 99.8 165 38.8
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 2.1e-15 88.2 71 64.8
arahy.Tifrunner.gnm1.ann1.GWKT0Q Arachis hypogaea HOM05D005625 ORTHO05D007564 3.7e-15 87.4 117 46.2
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 6.2e-15 86.7 70 64.3
arahy.Tifrunner.gnm1.ann1.6SNM9F Arachis hypogaea HOM05D005625 ORTHO05D007564 1.4e-14 85.5 113 48.7
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.0e-14 84.0 75 52.0
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 1.2e-13 82.4 70 61.4
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 1.2e-13 82.4 70 61.4
AagrBONN_evm.TU.Sc2ySwM_368.1004 Anthoceros agrestis HOM05D016773 ORTHO05D019668 6.5e-12 76.6 271 28.8
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 4.2e-11 73.9 68 55.9
Lsat_1_v5_gn_3_107600 Lactuca sativa HOM05D000629 ORTHO05D013393 7.1e-11 73.2 74 48.6
Cpa.g.c47759 Carica papaya HOM05D005625 ORTHO05D007564 1.3e-09 68.9 49 63.3
SMO009G0022 Selaginella moellendorffii HOM05D016773 ORTHO05D019668 1.3e-07 62.4 278 28.1
BolC2t08947H Brassica oleracea HOM05D005625 ORTHO05D022022 1.6e-07 62.0 87 44.8
arahy.Tifrunner.gnm1.ann1.QJV3PU Arachis hypogaea HOM05D003356 ORTHO05D086117 3.7e-07 60.8 76 48.7
arahy.Tifrunner.gnm1.ann1.P90V4Z Arachis hypogaea HOM05D002479 ORTHO05D002675 8.2e-07 59.7 36 72.2


User provided reference genes

Program Settings