Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.4e-196 689.5 354 100.0
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 2.5e-97 359.8 245 73.5
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 5.3e-92 342.0 245 71.8
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 8.2e-85 318.2 245 65.3
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 1.3e-77 294.3 239 63.6
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 1.8e-76 290.4 245 59.6
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 7.0e-76 288.5 245 59.6
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 1.7e-74 283.9 245 58.8
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 1.5e-73 280.8 245 59.2
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 1.9e-73 280.4 242 58.7
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 1.9e-73 280.4 245 60.0
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 2.5e-73 280.0 242 57.4
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 3.2e-73 279.6 245 60.0
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 7.2e-73 278.5 243 62.6
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 6.1e-72 275.4 242 57.4
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 2.3e-71 273.5 245 57.6
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 3.0e-71 273.1 242 56.6
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 5.2e-71 272.3 242 55.4
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.5e-70 270.8 190 70.5
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.3e-70 269.6 245 55.9
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 4.4e-70 269.2 242 55.0
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 5.7e-70 268.9 238 57.1
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 9.7e-70 268.1 260 58.8
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.2e-69 266.9 246 55.3
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 8.2e-69 265.0 241 58.5
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 1.8e-68 263.8 238 55.9
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 4.1e-68 262.7 241 56.0
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 7.0e-68 261.9 246 56.9
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 9.1e-68 261.5 241 53.5
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 5.9e-67 258.8 245 55.5
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 7.7e-67 258.5 243 57.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 2.9e-66 256.5 178 71.3
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 6.5e-66 255.4 245 53.1
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 1.5e-65 254.2 245 53.5
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 1.6e-64 250.8 241 54.4
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.6e-64 250.8 239 54.0
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 3.6e-64 249.6 240 55.0
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 3.6e-64 249.6 245 51.8
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 8.0e-64 248.4 245 51.8
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.4e-63 247.7 245 51.4
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.3e-63 246.9 245 51.0
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 5.2e-63 245.7 245 50.2
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 2.2e-61 240.4 255 52.5
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 4.8e-61 239.2 245 53.9
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 6.3e-61 238.8 245 52.2
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 8.3e-61 238.4 268 48.1
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 8.3e-61 238.4 242 51.2
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 1.1e-60 238.0 239 54.0
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 5.4e-60 235.7 245 49.8
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 7.0e-60 235.3 244 50.0
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 8.6e-58 228.4 264 50.4
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 1.1e-57 228.0 245 50.2
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 5.5e-57 225.7 245 48.6
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 7.2e-57 225.3 239 51.0
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 7.2e-57 225.3 255 47.1
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.6e-56 224.2 245 48.6
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 2.8e-56 223.4 255 46.7
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 2.8e-56 223.4 237 53.6
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 2.8e-56 223.4 245 47.3
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.8e-55 220.7 241 51.0
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.8e-55 220.7 242 48.3
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 3.0e-55 219.9 225 51.1
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 4.0e-55 219.5 239 49.8
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 5.2e-55 219.2 237 48.1
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 5.2e-55 219.2 245 48.2
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 4.4e-54 216.1 245 49.0
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 9.8e-54 214.9 239 48.5
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 2.2e-53 213.8 247 47.8
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 4.9e-53 212.6 245 46.1
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 1.8e-52 210.7 251 46.2
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 1.8e-52 210.7 243 46.5
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 4.1e-52 209.5 249 47.8
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 9.2e-52 208.4 247 45.3
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.0e-51 207.2 247 46.2
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 2.7e-51 206.8 245 46.5
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 2.7e-51 206.8 239 46.9
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 7.8e-51 205.3 250 46.0
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 2.3e-50 203.8 254 44.5
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 2.5e-49 200.3 251 44.2
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 7.3e-49 198.7 252 43.7
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 9.5e-49 198.4 251 45.0
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 1.0e-47 194.9 244 43.4
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 1.0e-47 194.9 262 43.5
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 5.2e-47 192.6 236 48.3
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 5.2e-47 192.6 248 46.0
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 2.6e-46 190.3 248 43.1
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 1.7e-45 187.6 170 61.2
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.4e-44 184.5 249 44.2
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 1.9e-44 184.1 249 44.2
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 2.4e-44 183.7 249 44.2
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 4.1e-44 183.0 244 43.0
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 5.4e-44 182.6 179 49.7
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 4.7e-40 169.5 246 43.9
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 1.1e-39 168.3 178 50.0
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.8e-39 167.5 254 42.5
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 6.8e-39 165.6 237 40.5
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.2e-38 164.9 240 42.9
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 1.5e-38 164.5 249 41.0
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 4.4e-38 162.9 253 40.3
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 4.9e-37 159.5 196 45.4
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 5.4e-36 156.0 137 57.7
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.1e-35 154.1 245 40.0
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 3.3e-33 146.7 246 39.8
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 9.5e-33 145.2 138 55.8
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 2.4e-28 130.6 142 52.8
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 3.2e-28 130.2 142 48.6
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 2.5e-25 120.6 202 34.7
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 3.3e-25 120.2 143 46.9
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 8.9e-23 112.1 208 33.7
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 4.4e-22 109.8 76 68.4
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.6e-19 101.3 60 81.7
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 2.1e-19 100.9 209 32.5
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 5.8e-14 82.8 59 66.1
vmacro17652 Vaccinium macrocarpon HOM05D006386 ORTHO05D426876 1.7e-13 81.3 65 69.2
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 4.9e-13 79.7 207 26.6
Aqoxy6G02623 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.4e-12 78.2 104 43.3
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.1e-11 74.3 41 78.0
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.5e-11 73.6 38 81.6
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 3.9e-10 70.1 106 39.6
COL.COLO4_24165 Corchorus olitorius HOM05D006386 ORTHO05D007575 5.1e-10 69.7 65 55.4
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 1.2e-06 58.5 41 61.0


User provided reference genes

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