Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.9e-69 265.8 139 100.0
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 4.5e-55 218.0 139 77.7
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.6e-50 202.2 141 73.0
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 2.6e-50 202.2 141 73.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 3.4e-50 201.8 139 73.4
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.7e-49 199.5 141 71.6
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.7e-49 199.5 139 74.8
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.7e-49 198.4 139 71.9
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.9e-49 198.0 141 71.6
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 8.3e-49 197.2 141 71.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.8e-48 196.1 135 72.6
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.4e-48 195.7 141 70.2
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 3.2e-48 195.3 138 70.3
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 4.1e-48 194.9 141 71.6
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.1e-48 194.9 136 73.5
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 5.4e-48 194.5 144 72.9
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 7.0e-48 194.1 129 76.0
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 5.9e-47 191.0 139 69.8
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 5.9e-47 191.0 138 70.3
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.0e-46 190.3 138 70.3
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 6.6e-46 187.6 139 69.8
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 8.6e-46 187.2 141 70.9
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.5e-45 186.4 151 65.6
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.9e-45 186.0 101 85.1
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.9e-45 186.0 134 71.6
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.9e-45 186.0 139 67.6
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.5e-45 185.7 137 69.3
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 2.5e-45 185.7 165 62.4
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 4.3e-45 184.9 139 69.1
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 4.3e-45 184.9 134 70.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 4.3e-45 184.9 139 69.1
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 5.6e-45 184.5 137 68.6
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 7.3e-45 184.1 128 72.7
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 7.3e-45 184.1 101 84.2
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 9.5e-45 183.7 139 67.6
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 9.5e-45 183.7 99 85.9
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 9.5e-45 183.7 101 83.2
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-44 183.3 118 75.4
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.6e-44 183.0 139 67.6
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.6e-44 183.0 136 69.9
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.1e-44 182.6 139 68.3
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 2.8e-44 182.2 137 68.6
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 2.8e-44 182.2 137 68.6
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.6e-44 181.8 127 72.4
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.7e-44 181.4 135 68.9
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.7e-44 181.4 131 68.7
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 6.2e-44 181.0 134 70.1
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 6.2e-44 181.0 139 68.3
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 8.0e-44 180.6 139 67.6
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.0e-43 180.3 118 74.6
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.0e-43 180.3 137 67.9
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.4e-43 179.9 134 70.1
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.8e-43 179.5 131 71.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.8e-43 179.5 134 70.1
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.3e-43 179.1 138 64.5
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.3e-43 179.1 102 83.3
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.3e-43 179.1 134 69.4
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.3e-43 179.1 136 66.2
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.3e-43 179.1 134 68.7
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 5.2e-43 177.9 117 74.4
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 5.2e-43 177.9 100 85.0
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 5.2e-43 177.9 100 84.0
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 5.2e-43 177.9 137 67.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 8.9e-43 177.2 100 83.0
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.2e-42 176.8 125 71.2
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.2e-42 176.8 100 83.0
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 1.5e-42 176.4 101 81.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.5e-42 176.4 101 80.2
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.0e-42 176.0 136 66.2
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 2.0e-42 176.0 100 83.0
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.4e-42 175.3 136 69.1
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 3.4e-42 175.3 110 79.1
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.4e-42 175.3 137 66.4
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 4.4e-42 174.9 134 65.7
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 5.8e-42 174.5 134 67.9
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 7.5e-42 174.1 137 66.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.3e-41 173.3 137 64.2
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.7e-41 172.9 134 67.2
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.2e-41 172.6 152 63.2
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.9e-41 172.2 101 79.2
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 4.9e-41 171.4 211 50.2
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 6.4e-41 171.0 133 65.4
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 8.3e-41 170.6 101 78.2
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 2.4e-40 169.1 132 64.4
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 4.1e-40 168.3 103 77.7
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.1e-40 168.3 138 63.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.0e-39 166.0 103 79.6
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 2.7e-39 165.6 95 82.1
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 3.5e-39 165.2 123 64.2
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 3.9e-38 161.8 131 65.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.9e-38 161.8 97 78.4
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 3.9e-38 161.8 101 73.3
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.0e-38 161.4 178 52.2
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 8.6e-38 160.6 142 60.6
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 4.3e-37 158.3 103 76.7
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 5.6e-37 157.9 169 52.7
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 1.6e-36 156.4 99 69.7
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.1e-36 156.0 99 71.7
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 4.7e-36 154.8 100 72.0
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.4e-35 153.3 149 56.4
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.8e-35 152.9 118 61.9
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 4.0e-35 151.8 113 68.1
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.5e-34 149.8 116 68.1
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.2e-31 140.2 79 82.3
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 4.6e-31 138.3 78 84.6
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.9e-30 135.2 103 65.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.9e-29 132.9 138 52.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 7.3e-29 131.0 75 78.7
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.7e-28 128.3 85 75.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.6e-26 122.5 64 93.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 8.4e-25 117.5 98 56.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.6e-23 113.2 67 79.1
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 6.0e-23 111.3 69 76.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 3.0e-22 109.0 67 77.6
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.5e-21 105.9 66 75.8
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 4.7e-20 101.7 59 78.0
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 6.8e-19 97.8 91 54.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.6e-18 95.9 71 67.6
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 7.6e-18 94.4 100 47.0
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 4.2e-16 88.6 103 41.7
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 5.4e-16 88.2 66 66.7
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.1e-15 86.3 57 73.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.5e-15 85.5 113 47.8
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 4.6e-15 85.1 98 38.8
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.8e-12 75.9 90 35.6
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.3e-06 56.2 68 50.0


User provided reference genes

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