Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007042 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D000586 4.9e-61 237.7 122 100.0
CSS0015887 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D000586 1.1e-31 140.2 135 62.2
EL10Ac3g06503 Beta vulgaris HOM05D000770 ORTHO05D000586 3.3e-09 65.5 57 64.9
Aqoxy2G03468 Aquilegia oxysepala HOM05D000770 ORTHO05D000586 2.8e-08 62.4 57 61.4
TAR365G1031 Trochodendron aralioides HOM05D000770 ORTHO05D000586 3.7e-08 62.0 57 61.4
TAR383G0990 Trochodendron aralioides HOM05D000770 ORTHO05D000586 3.7e-08 62.0 57 61.4
TAR636G3576 Trochodendron aralioides HOM05D000770 ORTHO05D000586 1.4e-07 60.1 57 59.6
VMungo0720G1226 Vigna mungo HOM05D000770 ORTHO05D000586 2.4e-07 59.3 57 56.1
Glyma.10G243300 Glycine max HOM05D000770 ORTHO05D000586 4.0e-07 58.5 57 54.4
Glyma.20G150900 Glycine max HOM05D000770 ORTHO05D000586 5.3e-07 58.2 57 56.1
Phvul.007G062400 Phaseolus vulgaris HOM05D000770 ORTHO05D000586 5.3e-07 58.2 57 57.9
Cc03_g04340 Coffea canephora HOM05D000770 ORTHO05D000586 1.2e-06 57.0 53 64.2
Nitab4.5_0007166g0030 Nicotiana tabacum HOM05D000770 ORTHO05D000586 1.2e-06 57.0 57 54.4
Oeu063367.1 Olea europaea HOM05D000770 ORTHO05D000586 1.5e-06 56.6 57 52.6
Sabra08G0120700 Salix brachista HOM05D000770 ORTHO05D000586 1.5e-06 56.6 57 49.1
Solyc09g082780.3 Solanum lycopersicum HOM05D000770 ORTHO05D000586 1.5e-06 56.6 57 54.4
Sopen09g031630 Solanum pennellii HOM05D000770 ORTHO05D000586 1.5e-06 56.6 57 54.4
PGSC0003DMG400030170 Solanum tuberosum HOM05D000770 ORTHO05D000586 1.5e-06 56.6 57 54.4
Ca_10842_v3 Cicer arietinum L. HOM05D000770 ORTHO05D000586 2.0e-06 56.2 57 54.4
Nitab4.5_0002652g0010 Nicotiana tabacum HOM05D000770 ORTHO05D000586 2.0e-06 56.2 57 54.4
Oeu018186.1 Olea europaea HOM05D000770 ORTHO05D000586 2.0e-06 56.2 68 45.6
AUR62034681 Chenopodium quinoa HOM05D000770 ORTHO05D000586 2.6e-06 55.8 44 63.6
Oeu058957.2 Olea europaea HOM05D000770 ORTHO05D000586 2.6e-06 55.8 57 50.9
Ah.11g050190 Amaranthus hybridus HOM05D000770 ORTHO05D000586 3.4e-06 55.5 57 49.1
Dinv14049 Davidia involucrata HOM05D003368 ORTHO05D001293 3.4e-06 55.5 44 63.6
Lalb_Chr03g0037481 Lupinus albus HOM05D000770 ORTHO05D000586 3.4e-06 55.5 68 48.5
Potri.010G081600 Populus trichocarpa HOM05D000770 ORTHO05D000586 3.4e-06 55.5 57 52.6
GSVIVG01018050001 Vitis vinifera HOM05D000770 ORTHO05D000586 3.4e-06 55.5 59 55.9
MD16G1200200 Malus domestica HOM05D000770 ORTHO05D000586 4.5e-06 55.1 57 54.4
MSTRG.9947 Avicennia marina HOM05D000770 ORTHO05D000586 5.8e-06 54.7 57 50.9
FAN17G0653 Fragaria x ananassa HOM05D000770 ORTHO05D000586 5.8e-06 54.7 45 57.8
Lj5g0024204 Lotus japonicus HOM05D000770 ORTHO05D000586 5.8e-06 54.7 68 47.1
Sc19g0003930 Simmondsia chinensis HOM05D000770 ORTHO05D000586 5.8e-06 54.7 57 54.4
CANSAT78G2309 Cannabis sativa HOM05D000770 ORTHO05D000586 7.6e-06 54.3 53 58.5
FvH4_4g01560 Fragaria vesca HOM05D000770 ORTHO05D000586 7.6e-06 54.3 45 60.0
FAN22G2101 Fragaria x ananassa HOM05D000770 ORTHO05D000586 7.6e-06 54.3 45 60.0
SGA_v2.0_scaffold79G25598 Striga asiatica HOM05D000770 ORTHO05D000586 7.6e-06 54.3 53 56.6
AUR62042981 Chenopodium quinoa HOM05D000770 ORTHO05D000586 1.0e-05 53.9 44 63.6
Migut.G00387 Erythranthe guttata HOM05D000770 ORTHO05D000586 1.0e-05 53.9 54 51.9
FAN12G2084 Fragaria x ananassa HOM05D000770 ORTHO05D000586 1.0e-05 53.9 56 53.6
MD13G1201000 Malus domestica HOM05D000770 ORTHO05D000586 1.0e-05 53.9 57 54.4


User provided reference genes

Program Settings