Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.6e-109 399.4 198 100.0
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 7.6e-64 247.7 198 68.7
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 1.1e-49 200.7 192 58.9
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.4e-49 200.3 193 58.0
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 3.8e-47 192.2 160 68.8
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 2.5e-46 189.5 183 57.4
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 9.4e-46 187.6 208 54.3
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.2e-45 187.2 205 55.1
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.6e-45 186.8 150 65.3
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 2.3e-44 183.0 153 65.4
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 2.3e-44 183.0 192 55.7
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 3.9e-44 182.2 148 66.2
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.0e-43 179.9 147 64.6
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.0e-43 179.9 138 69.6
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.5e-43 179.5 147 63.9
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 2.5e-43 179.5 187 56.7
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.5e-43 179.5 139 67.6
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 3.3e-43 179.1 106 81.1
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 4.3e-43 178.7 150 64.0
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 5.7e-43 178.3 125 70.4
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 7.4e-43 177.9 147 64.6
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 7.4e-43 177.9 147 64.6
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.3e-42 177.2 147 63.3
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-42 177.2 147 63.3
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.3e-42 177.2 147 63.3
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.3e-42 177.2 180 58.3
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 2.2e-42 176.4 208 52.4
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.7e-42 175.6 143 66.4
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.8e-42 175.3 95 84.2
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 6.3e-42 174.9 141 63.8
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.1e-41 174.1 142 64.8
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.4e-41 173.7 129 68.2
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.4e-41 173.7 179 57.0
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.8e-41 173.3 141 65.2
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.4e-41 172.9 179 56.4
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 2.4e-41 172.9 107 78.5
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 3.1e-41 172.6 107 78.5
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 4.1e-41 172.2 125 71.2
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 9.1e-41 171.0 143 64.3
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.2e-40 170.6 153 60.8
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 2.0e-40 169.9 204 52.0
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 2.0e-40 169.9 196 50.5
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 2.0e-40 169.9 102 77.5
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 5.9e-40 168.3 128 66.4
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.0e-39 167.5 90 85.6
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 2.2e-39 166.4 111 71.2
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 8.5e-39 164.5 140 62.1
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.1e-38 164.1 175 54.9
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.9e-38 163.3 89 86.5
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.9e-38 163.3 153 60.1
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 4.2e-38 162.2 99 77.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 9.4e-38 161.0 147 60.5
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 1.2e-37 160.6 149 61.1
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.2e-37 160.6 131 64.1
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 1.2e-37 160.6 175 55.4
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.6e-37 160.2 110 70.9
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.6e-37 160.2 110 70.9
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 2.1e-37 159.8 148 60.1
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 2.1e-37 159.8 151 58.9
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 3.6e-37 159.1 103 74.8
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 4.7e-37 158.7 118 71.2
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 4.7e-37 158.7 108 74.1
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 4.7e-37 158.7 175 53.1
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 6.1e-37 158.3 94 77.7
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 7.9e-37 157.9 99 75.8
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 1.4e-36 157.1 128 61.7
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 1.4e-36 157.1 157 56.1
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 2.3e-36 156.4 120 66.7
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 2.3e-36 156.4 107 72.9
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 5.1e-36 155.2 184 51.6
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 5.1e-36 155.2 142 62.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 6.7e-36 154.8 120 65.8
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.1e-35 154.1 91 76.9
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.5e-35 153.7 145 58.6
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 2.0e-35 153.3 127 62.2
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 2.6e-35 152.9 153 55.6
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.6e-35 152.9 93 75.3
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 3.3e-35 152.5 101 71.3
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 5.7e-35 151.8 111 68.5
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 7.4e-35 151.4 147 57.8
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.3e-34 150.6 160 55.0
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.2e-34 149.8 124 61.3
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.1e-33 147.5 89 75.3
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.4e-33 147.1 91 74.7
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.1e-33 145.6 89 75.3
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.6e-32 143.7 94 74.5
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 7.7e-32 141.4 99 67.7
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.2e-31 139.8 121 59.5
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 8.5e-31 137.9 89 70.8
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.1e-30 137.5 93 67.7
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.5e-30 137.1 100 68.0
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 3.2e-30 136.0 101 61.4
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.6e-29 133.7 91 69.2
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 6.1e-29 131.7 100 66.0
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 6.1e-29 131.7 91 69.2
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 4.0e-28 129.0 97 63.9
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 5.2e-28 128.6 140 52.1
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.1e-27 127.5 140 55.7
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 4.4e-27 125.6 70 82.9
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 4.4e-27 125.6 70 82.9
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 9.7e-27 124.4 106 59.4
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.8e-25 120.2 112 60.7
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 2.0e-24 116.7 71 74.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 5.9e-24 115.2 83 65.1
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.0e-23 114.4 101 52.5
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 6.5e-23 111.7 96 62.5
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 6.1e-21 105.1 101 49.5
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 8.0e-21 104.8 119 54.6
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.0e-20 104.4 87 55.2
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.3e-20 103.2 102 49.0
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.5e-19 100.5 95 60.0
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 5.7e-19 98.6 98 45.9
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 2.2e-18 96.7 178 40.4
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 7.2e-14 81.6 87 54.0
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 7.2e-14 81.6 87 54.0
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.0e-12 76.3 89 40.4
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.3e-10 70.9 67 56.7
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.4e-09 67.4 50 68.0


User provided reference genes

Program Settings