Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006965 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 1.9e-53 212.2 104 100.0
CSS0023614 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 1.1e-48 196.4 99 96.0
CSS0004849 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 6.6e-43 177.2 99 88.9
CSS0041096 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 2.5e-42 175.3 97 89.7
CSS0038098 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 1.1e-40 169.9 96 89.6
CSS0030359 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 1.2e-39 166.4 90 91.1
CSS0023995 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 2.0e-39 165.6 91 87.9
TPR.G27198 Trifolium pratense HOM05D000158 ORTHO05D000197 3.3e-10 68.6 93 41.9
TPR.G40697 Trifolium pratense HOM05D000158 ORTHO05D000197 3.3e-10 68.6 93 40.9
TPR.G7439 Trifolium pratense HOM05D000158 ORTHO05D000197 4.3e-10 68.2 90 41.1
TPR.G16515 Trifolium pratense HOM05D000158 ORTHO05D000197 5.7e-10 67.8 93 40.9
TPR.G34405 Trifolium pratense HOM05D000158 ORTHO05D000197 7.4e-10 67.4 98 37.8
HanXRQChr02g0042331 Helianthus annuus HOM05D000158 ORTHO05D000197 1.3e-09 66.6 81 44.4
HanXRQChr02g0042351 Helianthus annuus HOM05D000158 ORTHO05D000197 1.3e-09 66.6 81 44.4
PGSC0003DMG400039612 Solanum tuberosum HOM05D016461 ORTHO05D017121 2.2e-09 65.9 90 41.1
TPR.G39902 Trifolium pratense HOM05D000158 ORTHO05D000197 2.2e-09 65.9 89 42.7
Manes.05G131901 Manihot esculenta HOM05D000158 ORTHO05D000197 2.8e-09 65.5 80 40.0
Manes.06G001751 Manihot esculenta HOM05D000158 ORTHO05D000197 3.7e-09 65.1 104 34.6
Manes.10G055732 Manihot esculenta HOM05D000158 ORTHO05D000197 3.7e-09 65.1 60 45.0
Manes.16G057426 Manihot esculenta HOM05D000158 ORTHO05D000197 8.2e-09 63.9 102 36.3
Manes.S095214 Manihot esculenta HOM05D000158 ORTHO05D000197 8.2e-09 63.9 114 34.2
TPR.G33065 Trifolium pratense HOM05D000158 ORTHO05D000197 8.2e-09 63.9 98 35.7
Manes.17G018812 Manihot esculenta HOM05D000158 ORTHO05D000197 1.1e-08 63.5 70 40.0
Migut.O00081 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.8e-08 62.8 72 41.7
Migut.O00084 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.8e-08 62.8 72 41.7
Migut.O00085 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.8e-08 62.8 72 41.7
Sopen04g014260 Solanum pennellii HOM05D000158 ORTHO05D003926 1.8e-08 62.8 68 45.6
PGSC0003DMG400013070 Solanum tuberosum HOM05D000158 ORTHO05D017121 1.8e-08 62.8 99 37.4
Manes.10G080301 Manihot esculenta HOM05D000158 ORTHO05D000197 3.1e-08 62.0 87 37.9
arahy.Tifrunner.gnm1.ann1.P57W7I Arachis hypogaea HOM05D000158 ORTHO05D000197 5.3e-08 61.2 104 35.6
Manes.17G002683 Manihot esculenta HOM05D000158 ORTHO05D000197 5.3e-08 61.2 105 31.4
arahy.Tifrunner.gnm1.ann1.X0U8Y0 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.1e-08 60.5 93 37.6
Manes.07G056008 Manihot esculenta HOM05D000158 ORTHO05D000197 9.1e-08 60.5 84 36.9
arahy.Tifrunner.gnm1.ann1.N3555V Arachis hypogaea HOM05D000158 ORTHO05D000197 1.2e-07 60.1 92 35.9
Migut.O00086 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.2e-07 60.1 107 30.8
arahy.Tifrunner.gnm1.ann1.8UCL89 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-07 59.7 93 36.6
arahy.Tifrunner.gnm1.ann1.18PYUZ Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.39JP8F Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.4EM99Z Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.8102HM Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.82YQT6 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.I3DMP8 Arachis hypogaea HOM05D000158 ORTHO05D003614 2.0e-07 59.3 93 36.6
arahy.Tifrunner.gnm1.ann1.W04P42 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.0e-07 59.3 93 36.6
PGSC0003DMG400022758 Solanum tuberosum HOM05D000158 ORTHO05D010408 2.0e-07 59.3 57 47.4
arahy.Tifrunner.gnm1.ann1.XN6NS8 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.6e-07 58.9 104 34.6
Migut.H01165 Erythranthe guttata HOM05D000158 ORTHO05D000197 2.6e-07 58.9 94 34.0
Gorai.007G262100 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.6e-07 58.9 50 54.0
arahy.Tifrunner.gnm1.ann1.6U09DB Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 107 33.6
arahy.Tifrunner.gnm1.ann1.7I5EIZ Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 107 33.6
arahy.Tifrunner.gnm1.ann1.BL2XE1 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 73 38.4
arahy.Tifrunner.gnm1.ann1.FHI9NT Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 107 33.6
arahy.Tifrunner.gnm1.ann1.JCQ008 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 107 33.6
arahy.Tifrunner.gnm1.ann1.ZIM2T0 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.4e-07 58.5 99 35.4
Gorai.004G224200 Gossypium raimondii HOM05D000158 ORTHO05D000197 3.4e-07 58.5 50 54.0
Gorai.005G169400 Gossypium raimondii HOM05D000158 ORTHO05D000197 3.4e-07 58.5 50 54.0
arahy.Tifrunner.gnm1.ann1.BYBE5B Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 35.5
arahy.Tifrunner.gnm1.ann1.BYKP53 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 37.6
arahy.Tifrunner.gnm1.ann1.I3V9I7 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 35.5
arahy.Tifrunner.gnm1.ann1.M97NZA Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 35.5
arahy.Tifrunner.gnm1.ann1.MH5L6C Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 36.6
arahy.Tifrunner.gnm1.ann1.PC7CW8 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 93 36.6
arahy.Tifrunner.gnm1.ann1.V0BAMU Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 107 32.7
arahy.Tifrunner.gnm1.ann1.W4MS58 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.5e-07 58.2 115 34.8
arahy.Tifrunner.gnm1.ann1.N7R8CX Arachis hypogaea HOM05D000158 ORTHO05D000197 5.9e-07 57.8 90 36.7
arahy.Tifrunner.gnm1.ann1.Q72NH6 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.9e-07 57.8 90 36.7
arahy.Tifrunner.gnm1.ann1.S1Q5XH Arachis hypogaea HOM05D000158 ORTHO05D000197 5.9e-07 57.8 90 36.7
MSTRG.14068 Avicennia marina HOM05D000158 ORTHO05D000197 5.9e-07 57.8 86 46.5
MSTRG.8973 Avicennia marina HOM05D000158 ORTHO05D000197 5.9e-07 57.8 86 46.5
Gorai.002G201500 Gossypium raimondii HOM05D000158 ORTHO05D000197 5.9e-07 57.8 50 52.0
Manes.07G055686 Manihot esculenta HOM05D000158 ORTHO05D000197 5.9e-07 57.8 91 37.4
PGSC0003DMG400045496 Solanum tuberosum HOM05D010819 ORTHO05D010408 5.9e-07 57.8 72 40.3
PGSC0003DMG400045519 Solanum tuberosum HOM05D000158 ORTHO05D000197 5.9e-07 57.8 78 42.3
arahy.Tifrunner.gnm1.ann1.9F14AA Arachis hypogaea HOM05D000158 ORTHO05D000197 7.7e-07 57.4 108 34.3
arahy.Tifrunner.gnm1.ann1.HTN0Y5 Arachis hypogaea HOM05D000158 ORTHO05D000197 7.7e-07 57.4 108 34.3
arahy.Tifrunner.gnm1.ann1.N6DBBJ Arachis hypogaea HOM05D000158 ORTHO05D000197 7.7e-07 57.4 108 34.3
arahy.Tifrunner.gnm1.ann1.QGF57N Arachis hypogaea HOM05D000158 ORTHO05D000197 7.7e-07 57.4 108 34.3
Oeu007102.1 Olea europaea HOM05D000158 ORTHO05D010634 7.7e-07 57.4 63 41.3
arahy.Tifrunner.gnm1.ann1.4E97LE Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-06 57.0 54 42.6
arahy.Tifrunner.gnm1.ann1.A5BTLM Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-06 57.0 72 36.1
arahy.Tifrunner.gnm1.ann1.SEYZ0I Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-06 57.0 93 36.6
arahy.Tifrunner.gnm1.ann1.T0AVIE Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-06 57.0 74 33.8
arahy.Tifrunner.gnm1.ann1.UC4KU4 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.0e-06 57.0 95 31.6
Manes.11G096250 Manihot esculenta HOM05D000158 ORTHO05D000197 1.0e-06 57.0 50 46.0
arahy.Tifrunner.gnm1.ann1.GCX1C5 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.3e-06 56.6 54 42.6
arahy.Tifrunner.gnm1.ann1.QJW6VR Arachis hypogaea HOM05D000158 ORTHO05D000197 1.3e-06 56.6 54 42.6
Gorai.010G157800 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.3e-06 56.6 50 54.0
arahy.Tifrunner.gnm1.ann1.558G8J Arachis hypogaea HOM05D000158 ORTHO05D000197 1.7e-06 56.2 72 36.1
arahy.Tifrunner.gnm1.ann1.CX12M5 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.7e-06 56.2 110 32.7
arahy.Tifrunner.gnm1.ann1.I7E4L8 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.7e-06 56.2 107 33.6
Gorai.003G148400 Gossypium raimondii HOM05D000158 ORTHO05D000197 1.7e-06 56.2 89 39.3
Manes.02G210201 Manihot esculenta HOM05D000158 ORTHO05D000197 1.7e-06 56.2 89 34.8
Manes.09G074619 Manihot esculenta HOM05D000158 ORTHO05D000197 1.7e-06 56.2 74 35.1
PGSC0003DMG400040799 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.7e-06 56.2 57 45.6
Atru.chr13.2613 Acer truncatum HOM05D000158 ORTHO05D000197 2.2e-06 55.8 89 34.8
arahy.Tifrunner.gnm1.ann1.96HYEI Arachis hypogaea HOM05D000158 ORTHO05D000197 2.2e-06 55.8 93 35.5
arahy.Tifrunner.gnm1.ann1.9QV7LN Arachis hypogaea HOM05D000158 ORTHO05D000197 2.2e-06 55.8 80 37.5
arahy.Tifrunner.gnm1.ann1.C39H2M Arachis hypogaea HOM05D000158 ORTHO05D000197 2.2e-06 55.8 93 36.6
arahy.Tifrunner.gnm1.ann1.CIR6XW Arachis hypogaea HOM05D000158 ORTHO05D003614 2.2e-06 55.8 82 35.4
arahy.Tifrunner.gnm1.ann1.IW28EF Arachis hypogaea HOM05D000158 ORTHO05D000197 2.2e-06 55.8 54 42.6
arahy.Tifrunner.gnm1.ann1.JP535L Arachis hypogaea HOM05D000158 ORTHO05D000197 2.9e-06 55.5 108 33.3
Gorai.N000300 Gossypium raimondii HOM05D000158 ORTHO05D000197 2.9e-06 55.5 94 39.4
Oeu039579.1 Olea europaea HOM05D000158 ORTHO05D000197 2.9e-06 55.5 63 41.3
Oeu060640.1 Olea europaea HOM05D000158 ORTHO05D000197 2.9e-06 55.5 66 37.9
Oeu061534.1 Olea europaea HOM05D000158 ORTHO05D000197 2.9e-06 55.5 66 37.9
Sopen12g001100 Solanum pennellii HOM05D000158 ORTHO05D000197 2.9e-06 55.5 53 47.2
Atru.chr12.2446 Acer truncatum HOM05D000158 ORTHO05D002858 3.8e-06 55.1 103 34.0
Atru.chr4.265 Acer truncatum HOM05D000158 ORTHO05D000197 3.8e-06 55.1 53 45.3
arahy.Tifrunner.gnm1.ann1.PEX7VM Arachis hypogaea HOM05D000158 ORTHO05D000197 3.8e-06 55.1 72 37.5
arahy.Tifrunner.gnm1.ann1.X7VQJY Arachis hypogaea HOM05D000158 ORTHO05D002858 3.8e-06 55.1 106 34.9
Gorai.011G157800 Gossypium raimondii HOM05D000158 ORTHO05D000197 3.8e-06 55.1 89 39.3
Manes.10G066150 Manihot esculenta HOM05D000158 ORTHO05D000197 3.8e-06 55.1 81 40.7
Oeu061732.1 Olea europaea HOM05D000158 ORTHO05D010634 3.8e-06 55.1 63 39.7
arahy.Tifrunner.gnm1.ann1.0VPI4Y Arachis hypogaea HOM05D000158 ORTHO05D000197 5.0e-06 54.7 54 40.7
arahy.Tifrunner.gnm1.ann1.QG9Y2W Arachis hypogaea HOM05D000158 ORTHO05D000197 5.0e-06 54.7 92 29.3
arahy.Tifrunner.gnm1.ann1.ZZQG32 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.0e-06 54.7 69 33.3
Oeu006234.1 Olea europaea HOM05D000158 ORTHO05D000197 5.0e-06 54.7 63 39.7
TWI56G0231 Tripterygium wilfordii HOM05D000158 ORTHO05D000197 5.0e-06 54.7 75 38.7
arahy.Tifrunner.gnm1.ann1.7FSK73 Arachis hypogaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 56 39.3
arahy.Tifrunner.gnm1.ann1.CSCY03 Arachis hypogaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 54 40.7
arahy.Tifrunner.gnm1.ann1.HEVL9E Arachis hypogaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 54 40.7
arahy.Tifrunner.gnm1.ann1.IZ73GG Arachis hypogaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 73 37.0
Oeu032940.1 Olea europaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 66 37.9
Oeu047703.1 Olea europaea HOM05D000158 ORTHO05D000197 6.5e-06 54.3 66 36.4
arahy.Tifrunner.gnm1.ann1.1P3WRE Arachis hypogaea HOM05D000158 ORTHO05D000197 8.5e-06 53.9 99 31.3
arahy.Tifrunner.gnm1.ann1.BYA8HJ Arachis hypogaea HOM05D000158 ORTHO05D000197 8.5e-06 53.9 54 40.7
arahy.Tifrunner.gnm1.ann1.M3KMZQ Arachis hypogaea HOM05D000158 ORTHO05D000197 8.5e-06 53.9 72 34.7
arahy.Tifrunner.gnm1.ann1.WK8KCR Arachis hypogaea HOM05D000158 ORTHO05D000197 8.5e-06 53.9 80 35.0
Oeu028306.1 Olea europaea HOM05D000158 ORTHO05D000197 8.5e-06 53.9 67 35.8
PGSC0003DMG400036915 Solanum tuberosum HOM05D000158 ORTHO05D000197 8.5e-06 53.9 78 39.7


User provided reference genes

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