Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.0e-38 162.9 83 100.0
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 1.1e-24 116.3 84 76.2
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 1.8e-22 109.0 77 70.1
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.0e-22 108.2 80 68.8
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.1e-21 106.3 80 67.5
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 1.1e-21 106.3 82 65.9
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.5e-21 105.9 78 67.9
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.0e-21 105.5 77 67.5
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 5.7e-21 104.0 76 71.1
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.7e-20 102.4 86 68.6
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.7e-20 102.4 86 68.6
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.2e-20 102.1 78 69.2
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.7e-20 101.3 79 65.8
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 3.7e-20 101.3 82 69.5
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 4.8e-20 100.9 85 72.9
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 8.2e-20 100.1 79 65.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.2e-18 96.3 78 64.1
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 5.9e-18 94.0 81 64.2
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 7.7e-18 93.6 79 60.8
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 1.3e-17 92.8 75 65.3
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 2.2e-17 92.0 77 66.2
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 2.9e-17 91.7 75 62.7
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 3.8e-17 91.3 79 59.5
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 6.5e-17 90.5 75 60.0
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 8.5e-17 90.1 76 60.5
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.5e-16 89.4 79 63.3
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.9e-16 89.0 83 60.2
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 4.2e-16 87.8 83 59.0
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.2e-15 86.3 76 56.6
FvH4_3g01970 Fragaria vesca HOM05D007037 ORTHO05D006691 2.1e-15 85.5 78 59.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.7e-15 85.1 78 57.7
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-15 85.1 79 59.5
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 3.6e-15 84.7 75 60.0
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 3.6e-15 84.7 76 59.2
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 6.1e-15 84.0 83 59.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 6.1e-15 84.0 80 57.5
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 6.1e-15 84.0 82 56.1
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.0e-14 83.2 87 59.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.4e-14 82.8 79 59.5
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 6.8e-14 80.5 76 56.6
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 8.8e-14 80.1 77 59.7
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 1.5e-13 79.3 80 57.5
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.5e-13 79.3 76 59.2
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.7e-13 77.4 77 55.8
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 5.7e-13 77.4 76 53.9
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 5.7e-13 77.4 67 62.7
Ca_26471_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 6.3e-12 73.9 84 50.0
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.1e-11 73.2 79 50.6
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 1.4e-11 72.8 78 52.6
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.4e-11 72.8 82 48.8
Sopen02g025300 Solanum pennellii HOM05D007037 ORTHO05D006691 3.1e-11 71.6 79 53.2
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 3.1e-11 71.6 81 48.1
Actinidia09718 Actinidia chinensis HOM05D007037 ORTHO05D006691 1.2e-10 69.7 84 50.0
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 1.2e-10 69.7 79 49.4
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 3.5e-10 68.2 78 51.3
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 4.5e-10 67.8 79 48.1
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 5.9e-10 67.4 82 46.3
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 1.0e-09 66.6 78 48.7
Cc05_g04380 Coffea canephora HOM05D007037 ORTHO05D006691 1.3e-09 66.2 82 53.7
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 1.7e-09 65.9 78 48.7
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 2.2e-09 65.5 78 48.7
Rhsim13G0153300 Rhododendron simsii HOM05D007037 ORTHO05D006691 2.2e-09 65.5 78 51.3
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 3.8e-09 64.7 76 46.1
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 3.8e-09 64.7 78 47.4
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 3.8e-09 64.7 78 47.4
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 3.8e-09 64.7 78 47.4
Zm00001eb048920 Zea mays HOM05D007037 ORTHO05D006691 5.0e-09 64.3 80 50.0
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 6.5e-09 63.9 78 47.4
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 8.5e-09 63.5 76 46.1
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 8.5e-09 63.5 82 48.8
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 8.5e-09 63.5 71 46.5
Gohir.D13G171150 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.1e-08 63.2 80 46.2
Gorai.013G189700 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.1e-08 63.2 80 47.5
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 1.5e-08 62.8 76 46.1
arahy.Tifrunner.gnm1.ann1.98H95S Arachis hypogaea HOM05D007037 ORTHO05D006691 4.2e-08 61.2 79 48.1
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 5.5e-08 60.8 79 46.8
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 5.5e-08 60.8 78 47.4
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 5.5e-08 60.8 88 44.3
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 7.2e-08 60.5 82 47.6
HanXRQChr16g0506491 Helianthus annuus HOM05D007037 ORTHO05D006691 9.4e-08 60.1 80 43.8
Nn1g07147 Nelumbo nucifera HOM05D009550 ORTHO05D006691 9.4e-08 60.1 86 44.2
CSS0005463 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 2.7e-07 58.5 93 41.9
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 2.7e-07 58.5 78 43.6
Gohir.D13G171533 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.7e-07 58.5 77 46.8
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 3.6e-07 58.2 80 42.5
ATR0712G042 Amborella trichopoda HOM05D003533 ORTHO05D004009 4.7e-07 57.8 83 44.6
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 6.1e-07 57.4 91 41.8
Hund23465 Selenicereus undatus HOM05D007037 ORTHO05D006691 8.0e-07 57.0 79 48.1
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 1.0e-06 56.6 80 42.5
arahy.Tifrunner.gnm1.ann1.CZMF37 Arachis hypogaea HOM05D007037 ORTHO05D006691 1.0e-06 56.6 78 46.2
unitig_748.g7588 Utricularia gibba HOM05D007037 ORTHO05D006691 1.0e-06 56.6 83 41.0
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 1.8e-06 55.8 81 40.7
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 1.8e-06 55.8 79 48.1
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 2.3e-06 55.5 80 41.2
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 2.3e-06 55.5 78 44.9
DCAR_019271 Daucus carota HOM05D007037 ORTHO05D006691 2.3e-06 55.5 80 43.8
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 2.3e-06 55.5 82 41.5
Potri.014G153900 Populus trichocarpa HOM05D009550 ORTHO05D006691 2.3e-06 55.5 84 46.4
ATR0712G093 Amborella trichopoda HOM05D003533 ORTHO05D004009 5.2e-06 54.3 83 42.2
Gohir.D11G101450 Gossypium hirsutum HOM05D007037 ORTHO05D006691 5.2e-06 54.3 78 39.7
Gorai.007G108200 Gossypium raimondii HOM05D007037 ORTHO05D006691 5.2e-06 54.3 78 39.7
Os03g0574600 Oryza sativa ssp. japonica HOM05D007037 ORTHO05D006691 5.2e-06 54.3 80 45.0
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 6.8e-06 53.9 76 43.4
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 8.8e-06 53.5 62 54.8


User provided reference genes

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