Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 3.2e-155 551.6 257 100.0
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.1e-128 463.4 215 99.5
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 6.1e-114 414.5 215 87.4
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 8.8e-113 410.6 216 85.2
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 8.8e-113 410.6 215 87.9
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.1e-106 389.4 214 79.9
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 4.9e-103 378.3 215 77.2
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 4.1e-102 375.2 213 77.0
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 3.5e-101 372.1 215 77.7
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 4.5e-101 371.7 214 76.2
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 3.8e-100 368.6 215 76.7
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.1e-99 367.1 215 75.8
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.5e-99 366.7 214 75.7
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 1.9e-99 366.3 214 76.6
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 2.5e-99 365.9 214 78.0
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 2.5e-99 365.9 214 76.2
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 3.3e-99 365.5 215 75.3
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 9.5e-99 364.0 214 75.2
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 1.6e-98 363.2 214 75.7
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 1.6e-98 363.2 213 76.5
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 2.8e-98 362.5 215 73.5
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 2.8e-98 362.5 215 76.3
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 2.8e-98 362.5 215 75.3
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 2.8e-98 362.5 215 75.3
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 3.6e-98 362.1 214 74.3
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 3.6e-98 362.1 214 78.0
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 4.7e-98 361.7 214 75.2
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 8.0e-98 360.9 224 71.4
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 1.0e-97 360.5 214 74.8
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 1.4e-97 360.1 228 68.9
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 1.8e-97 359.8 236 69.1
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 3.0e-97 359.0 216 73.1
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 4.0e-97 358.6 214 74.8
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 4.0e-97 358.6 214 73.4
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 5.2e-97 358.2 216 73.1
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 8.9e-97 357.5 216 73.6
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 1.2e-96 357.1 215 73.0
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 1.2e-96 357.1 213 76.1
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 1.2e-96 357.1 214 72.9
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 2.0e-96 356.3 213 76.1
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 3.4e-96 355.5 216 73.1
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 3.4e-96 355.5 214 72.9
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 3.4e-96 355.5 214 74.8
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 9.8e-96 354.0 213 74.2
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 9.8e-96 354.0 214 72.4
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 2.9e-95 352.4 214 71.5
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 6.4e-95 351.3 214 73.4
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 8.3e-95 350.9 214 73.4
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.4e-94 350.1 214 72.4
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 1.8e-94 349.7 216 74.1
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.8e-94 349.7 214 71.0
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.8e-94 349.7 214 71.0
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.4e-94 349.4 214 73.4
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 5.4e-94 348.2 215 73.5
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 1.2e-93 347.1 214 70.6
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.6e-93 346.7 214 70.1
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 2.7e-93 345.9 214 70.1
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 4.6e-93 345.1 216 70.8
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 7.8e-93 344.4 233 67.8
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 1.7e-92 343.2 233 67.8
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 6.6e-92 341.3 214 71.5
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 3.3e-91 339.0 215 70.7
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 5.6e-91 338.2 215 72.6
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.6e-90 336.7 214 69.6
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 2.1e-90 336.3 213 71.4
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 2.1e-90 336.3 214 70.6
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 2.8e-90 335.9 212 70.8
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 3.6e-90 335.5 214 71.5
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 8.0e-90 334.3 216 71.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 1.0e-89 334.0 214 70.1
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.4e-89 333.6 214 68.2
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 8.9e-89 330.9 214 69.2
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 2.0e-88 329.7 214 70.6
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 2.6e-88 329.3 214 68.7
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 1.3e-87 327.0 225 66.7
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 1.7e-87 326.6 218 69.3
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 6.4e-87 324.7 213 68.5
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 4.1e-86 322.0 213 67.6
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 5.4e-86 321.6 223 64.6
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 7.0e-86 321.2 243 62.1
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 1.2e-85 320.5 213 68.1
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 2.7e-85 319.3 213 68.1
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 2.8e-82 309.3 214 63.6
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.4e-81 307.0 213 62.9
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 7.5e-80 301.2 213 63.4
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 7.5e-80 301.2 214 62.1
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 9.8e-80 300.8 213 62.4
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 1.7e-79 300.1 213 62.9
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 3.7e-79 298.9 213 62.0
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 3.7e-79 298.9 215 63.7
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 1.9e-78 296.6 213 61.5
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 2.4e-78 296.2 213 62.0
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 4.1e-78 295.4 213 61.0
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 2.1e-77 293.1 213 60.1
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 3.5e-77 292.4 215 66.0
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 1.0e-76 290.8 222 59.0
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 9.5e-75 284.3 213 59.2
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 9.9e-72 274.2 212 59.9
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 1.7e-71 273.5 212 59.4
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.2e-69 267.3 216 55.6
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.6e-69 266.9 215 54.9
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 2.1e-69 266.5 136 91.2
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 2.4e-62 243.0 136 79.4
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 5.4e-62 241.9 214 49.1
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 5.8e-56 221.9 214 49.5
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 1.1e-51 207.6 212 44.8
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 8.1e-50 201.4 118 81.4
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 1.0e-44 184.5 107 81.3
Cpa.g.sc17.83 Carica papaya HOM05D004072 ORTHO05D005933 2.4e-41 173.3 114 67.5
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 1.5e-40 170.6 95 77.9
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 3.3e-35 152.9 116 59.5
Cpa.g.sc17.84 Carica papaya HOM05D004072 ORTHO05D019491 1.5e-24 117.5 82 68.3
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 4.5e-24 115.9 62 83.9
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 8.5e-23 111.7 219 32.9
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 5.3e-17 92.4 65 60.0
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 5.5e-14 82.4 163 31.3
Duzib248G0219 Durio zibethinus HOM05D004072 ORTHO05D019491 7.2e-14 82.0 50 76.0
TPR.G28617 Trifolium pratense HOM05D004072 ORTHO05D005933 3.6e-13 79.7 163 31.3
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 6.1e-13 79.0 163 30.1
RcHm_v2.0_Chr1g0313161 Rosa chinensis HOM05D004072 ORTHO05D005933 1.4e-12 77.8 168 31.5
Hma1.2p1_1600F.1_g293150 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 2.3e-12 77.0 164 32.9
Lsat_1_v5_gn_7_25100 Lactuca sativa HOM05D003161 ORTHO05D005173 3.9e-12 76.3 68 54.4
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 3.3e-11 73.2 164 31.7
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 2.2e-10 70.5 160 30.0
CBR_g58028 Chara braunii HOM05D004072 ORTHO05D005933 3.7e-10 69.7 161 32.3
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 9.1e-09 65.1 105 32.4
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 1.6e-08 64.3 171 28.1
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 3.5e-08 63.2 175 28.0
Cpa.g.sc17.85 Carica papaya HOM05D004072 ORTHO05D005933 4.5e-08 62.8 94 29.8
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.2e-07 60.5 151 28.5


User provided reference genes

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