Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.7e-91 339.3 171 100.0
CSS0039646 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 5.4e-82 307.8 172 91.3
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.5e-79 298.9 172 89.5
CSS0019356 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.2e-43 179.5 107 86.0
CSS0046849 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.2e-30 134.8 94 77.7
CSS0012798 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.4e-29 132.9 106 68.9
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.3e-16 89.7 115 43.5
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 5.1e-16 88.6 139 41.7
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-15 87.0 115 43.5
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 1.6e-14 83.6 149 38.3
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 1.1e-13 80.9 160 38.1
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 3.1e-13 79.3 147 36.1
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 5.3e-13 78.6 127 38.6
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 5.3e-13 78.6 127 38.6
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 6.9e-13 78.2 127 38.6
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.2e-11 73.2 110 39.1
Rhsim12G0082000 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.9e-11 72.8 125 35.2
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.8e-11 72.4 101 45.5
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-11 72.0 125 38.4
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.5e-11 71.6 103 42.7
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.4e-11 71.2 130 36.9
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.4e-11 71.2 118 34.7
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 1.9e-10 70.1 121 35.5
BcaC01g06452 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-10 69.7 127 33.9
A03p13080 Brassica napus HOM05D007210 ORTHO05D006152 4.2e-10 68.9 149 29.5
BraA03t10619Z Brassica rapa HOM05D007210 ORTHO05D006152 4.2e-10 68.9 149 29.5
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 5.5e-10 68.6 127 33.1
A03p13090 Brassica napus HOM05D007210 ORTHO05D006152 5.5e-10 68.6 151 30.5
BraA03t10618Z Brassica rapa HOM05D007210 ORTHO05D006152 5.5e-10 68.6 151 30.5
BolC3t13970H Brassica oleracea HOM05D007210 ORTHO05D006152 7.1e-10 68.2 149 28.9
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.1e-10 68.2 176 30.7
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.1e-10 68.2 181 29.8
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.1e-10 68.2 181 29.8
BcaC01g06453 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-09 67.4 151 29.1
BcaNung05242 Brassica carinata HOM05D007210 ORTHO05D006152 1.2e-09 67.4 151 29.1
BolC3t13971H Brassica oleracea HOM05D007210 ORTHO05D006152 1.2e-09 67.4 153 29.4
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-09 67.4 121 34.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-09 67.4 121 34.7
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.2e-09 67.4 100 40.0
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-09 66.2 121 34.7
arahy.Tifrunner.gnm1.ann1.U7E3JB Arachis hypogaea HOM05D010841 ORTHO05D007789 3.5e-09 65.9 90 38.9
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 3.5e-09 65.9 118 34.7
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 6.1e-09 65.1 110 36.4
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 6.1e-09 65.1 118 34.7
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 6.1e-09 65.1 118 34.7
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 7.9e-09 64.7 149 28.9
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.9e-09 64.7 98 43.9
arahy.Tifrunner.gnm1.ann1.E31NWF Arachis hypogaea HOM05D010841 ORTHO05D007789 1.0e-08 64.3 89 40.4
C03p15310 Brassica napus HOM05D007210 ORTHO05D006152 1.0e-08 64.3 141 30.5
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.0e-08 64.3 124 32.3
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 1.3e-08 63.9 110 36.4
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 1.3e-08 63.9 107 36.4
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-08 63.5 179 30.2
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.3e-08 63.2 117 35.9
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 2.3e-08 63.2 118 32.2
BcaC01g06454 Brassica carinata HOM05D007210 ORTHO05D006152 3.0e-08 62.8 126 30.2
C03p15300 Brassica napus HOM05D007210 ORTHO05D006152 3.0e-08 62.8 126 30.2
Cc02_g24850 Coffea canephora HOM05D021019 ORTHO05D010647 3.9e-08 62.4 130 33.1
Thecc.01G408800 Theobroma cacao HOM05D008623 ORTHO05D007789 3.9e-08 62.4 87 34.5
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.9e-08 62.4 114 37.7
Rhsim12G0199500 Rhododendron simsii HOM05D000727 ORTHO05D000541 5.1e-08 62.0 70 50.0
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.1e-08 62.0 123 30.9
arahy.Tifrunner.gnm1.ann1.J4CNX7 Arachis hypogaea HOM05D010841 ORTHO05D007789 6.7e-08 61.6 90 36.7
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 6.7e-08 61.6 90 34.4
Rhsim13G0014700 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.7e-08 61.6 112 37.5
C09p48590 Brassica napus HOM05D007210 ORTHO05D006152 8.7e-08 61.2 151 30.5
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 8.7e-08 61.2 128 31.2
AL4G33850 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 1.5e-07 60.5 152 27.6
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-07 60.5 97 36.1
Rhsim08G0153800 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.9e-07 60.1 138 33.3
BcaNung05243 Brassica carinata HOM05D007210 ORTHO05D006152 2.5e-07 59.7 126 31.0
AL2G12230 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 3.3e-07 59.3 127 27.6
AL7G23520 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 3.3e-07 59.3 106 35.8
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 3.3e-07 59.3 175 26.9
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-07 59.3 91 41.8
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 4.3e-07 58.9 122 32.0
AL2G12220 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 5.7e-07 58.5 127 28.3
CARHR048290 Cardamine hirsuta HOM05D007210 ORTHO05D006152 5.7e-07 58.5 121 35.5
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 5.7e-07 58.5 114 35.1
Lj1A748T28 Lonicera japonica HOM05D011954 ORTHO05D014236 5.7e-07 58.5 123 35.0
arahy.Tifrunner.gnm1.ann1.UYW4TV Arachis hypogaea HOM05D010841 ORTHO05D007789 7.4e-07 58.2 94 37.2
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 7.4e-07 58.2 120 31.7
arahy.Tifrunner.gnm1.ann1.G2WS8B Arachis hypogaea HOM05D010841 ORTHO05D007789 9.7e-07 57.8 94 37.2
BcaB07g31384 Brassica carinata HOM05D007210 ORTHO05D006152 9.7e-07 57.8 138 30.4
A10p14190 Brassica napus HOM05D007210 ORTHO05D006152 1.3e-06 57.4 124 34.7
BraA10t43512Z Brassica rapa HOM05D007210 ORTHO05D006152 1.3e-06 57.4 124 34.7
Sed0026611 Sechium edule HOM05D008623 ORTHO05D007789 1.3e-06 57.4 101 33.7
arahy.Tifrunner.gnm1.ann1.JW8DXZ Arachis hypogaea HOM05D010841 ORTHO05D007789 1.6e-06 57.0 90 35.6
arahy.Tifrunner.gnm1.ann1.IT7CRT Arachis hypogaea HOM05D010841 ORTHO05D007789 2.2e-06 56.6 94 37.2
A10p14200 Brassica napus HOM05D007210 ORTHO05D006152 2.2e-06 56.6 134 31.3
BraA10t43513Z Brassica rapa HOM05D007210 ORTHO05D006152 2.2e-06 56.6 134 31.3
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.2e-06 56.6 95 41.1
Aa31LG4G17100 Aethionema arabicum HOM05D002666 ORTHO05D004769 2.8e-06 56.2 107 37.4
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 2.8e-06 56.2 134 29.1
Sp2g04770 Schrenkiella parvula HOM05D007210 ORTHO05D006152 2.8e-06 56.2 115 31.3
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-06 55.8 117 31.6
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.7e-06 55.8 126 35.7
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 3.7e-06 55.8 124 33.1
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.8e-06 55.5 117 31.6
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.8e-06 55.5 126 34.9
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 4.8e-06 55.5 124 32.3
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 4.8e-06 55.5 160 31.2
Rhsim09G0029000 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.8e-06 55.5 138 34.1
A09p15630 Brassica napus HOM05D007210 ORTHO05D006152 6.3e-06 55.1 138 29.0
BraA09t37203Z Brassica rapa HOM05D007210 ORTHO05D006152 6.3e-06 55.1 138 29.0
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 6.3e-06 55.1 97 37.1
CARHR270660 Cardamine hirsuta HOM05D007210 ORTHO05D006152 6.3e-06 55.1 122 32.8
Aa31LG4G17090 Aethionema arabicum HOM05D002666 ORTHO05D004769 8.2e-06 54.7 129 33.3
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-06 54.7 123 33.3
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.2e-06 54.7 117 31.6
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.2e-06 54.7 94 37.2
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.2e-06 54.7 96 37.5


User provided reference genes

Program Settings