Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.0e-109 400.6 287 100.0
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 4.6e-102 375.2 201 95.5
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 1.2e-62 244.2 222 61.7
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 7.2e-55 218.4 218 58.3
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 8.5e-48 194.9 211 55.0
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 1.4e-45 187.6 200 52.0
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 2.3e-45 186.8 202 55.9
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 4.8e-43 179.1 209 51.7
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 6.3e-43 178.7 205 49.8
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 1.4e-42 177.6 206 52.4
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 1.8e-42 177.2 226 47.3
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 2.4e-42 176.8 226 48.2
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 5.9e-41 172.2 203 51.7
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 7.7e-41 171.8 207 54.6
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 1.7e-40 170.6 217 50.2
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 6.5e-40 168.7 228 49.1
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 8.5e-40 168.3 228 47.4
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 1.1e-39 167.9 228 48.7
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.4e-37 161.0 210 45.7
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 5.2e-37 159.1 200 47.5
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 2.0e-36 157.1 221 48.4
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 4.4e-36 156.0 211 47.9
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 5.7e-36 155.6 210 47.6
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 8.3e-35 151.8 223 44.4
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 7.7e-33 145.2 205 47.3
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 3.8e-32 142.9 216 45.8
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 3.8e-32 142.9 205 45.4
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 3.8e-32 142.9 200 46.5
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 2.5e-31 140.2 209 44.0
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 3.2e-31 139.8 212 42.9
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 7.2e-31 138.7 213 47.4
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 9.4e-31 138.3 200 47.5
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 1.6e-30 137.5 205 43.9
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 2.7e-30 136.7 212 41.5
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 8.0e-30 135.2 211 42.2
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 1.4e-29 134.4 207 45.4
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 1.8e-29 134.0 212 43.4
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 3.0e-29 133.3 214 42.1
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 4.0e-29 132.9 204 44.6
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 6.8e-29 132.1 211 42.7
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 8.8e-29 131.7 208 48.1
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 1.2e-28 131.3 207 41.5
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 4.4e-28 129.4 208 42.3
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 9.8e-28 128.3 208 39.9
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.2e-27 127.1 218 41.7
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 2.8e-27 126.7 207 42.0
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.1e-26 124.8 217 41.5
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 7.0e-26 122.1 207 38.6
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 7.0e-26 122.1 207 41.1
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 7.0e-26 122.1 209 40.2
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 9.1e-26 121.7 215 38.6
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 2.7e-25 120.2 208 40.9
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 2.9e-24 116.7 208 39.9
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 1.5e-23 114.4 203 41.4
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 1.5e-23 114.4 203 41.4
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 1.9e-23 114.0 200 36.5
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 2.5e-23 113.6 211 43.6
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 5.5e-23 112.5 203 41.4
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 7.2e-23 112.1 196 38.8
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 1.6e-22 110.9 202 41.1
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 1.6e-22 110.9 220 38.2
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 3.6e-22 109.8 201 39.8
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 6.1e-22 109.0 203 39.4
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 8.0e-22 108.6 205 40.0
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 1.0e-21 108.2 209 37.8
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 1.8e-21 107.5 201 39.3
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 1.8e-21 107.5 203 39.4
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 2.3e-21 107.1 201 39.3
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 5.2e-21 105.9 205 40.5
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 6.8e-21 105.5 199 38.7
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 8.9e-21 105.1 199 38.2
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 8.9e-21 105.1 199 38.2
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.2e-20 104.8 211 37.0
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 1.5e-20 104.4 212 36.3
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 1.5e-20 104.4 209 38.8
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.0e-20 104.0 199 38.2
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.4e-20 102.8 215 35.8
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 7.5e-20 102.1 216 41.2
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 7.5e-20 102.1 212 38.2
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 7.5e-20 102.1 203 38.9
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 9.8e-20 101.7 217 40.1
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 9.8e-20 101.7 129 45.0
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 1.7e-19 100.9 193 39.4
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 1.7e-19 100.9 205 38.0
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.7e-19 100.9 211 37.0
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 2.8e-19 100.1 211 37.0
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 4.9e-19 99.4 198 39.9
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 6.3e-19 99.0 199 37.2
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 6.3e-19 99.0 199 38.2
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 1.4e-18 97.8 227 35.2
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 2.4e-18 97.1 224 36.2
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 1.2e-17 94.7 214 35.5
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 1.2e-17 94.7 204 36.3
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 1.6e-17 94.4 211 38.9
SGA_v2.0_scaffold20G09266 Striga asiatica HOM05D006310 ORTHO05D007768 2.0e-17 94.0 204 38.2
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 3.5e-17 93.2 218 35.8
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 4.5e-17 92.8 206 37.4
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 1.7e-16 90.9 200 38.0
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.9e-16 90.1 201 34.8
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 6.6e-16 89.0 202 38.1
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 8.6e-16 88.6 206 34.0
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 3.3e-15 86.7 226 34.1
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 4.3e-15 86.3 200 36.0
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 7.3e-15 85.5 204 37.3
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 9.5e-15 85.1 217 35.5
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 1.2e-14 84.7 204 36.8
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 1.2e-14 84.7 200 34.5
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 1.6e-14 84.3 216 33.8
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 6.1e-14 82.4 211 37.4
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 2.0e-12 77.4 196 32.1
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 3.4e-12 76.6 200 33.5
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 2.2e-11 73.9 202 32.7
Gorai.013G234200 Gossypium raimondii HOM05D001903 ORTHO05D001847 2.9e-11 73.6 207 35.3
Gohir.A13G199800 Gossypium hirsutum HOM05D001903 ORTHO05D001847 8.3e-11 72.0 211 36.0
Gohir.D13G205300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.1e-10 71.6 209 34.9
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 1.1e-10 71.6 197 30.5
Eucgr.E00267 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.3e-08 64.7 64 56.2
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 1.3e-08 64.7 200 30.5
DCAR_016260 Daucus carota HOM05D000020 ORTHO05D000543 3.0e-08 63.5 91 40.7
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 3.9e-08 63.2 50 62.0
Cc06_g08340 Coffea canephora HOM05D001903 ORTHO05D001847 6.6e-08 62.4 212 28.8
Ca_21670_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 8.6e-08 62.0 124 36.3
Aa31LG2G18260 Aethionema arabicum HOM05D001903 ORTHO05D001847 3.3e-07 60.1 71 50.7
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 3.3e-07 60.1 95 38.9
Dinv30598 Davidia involucrata HOM05D001903 ORTHO05D001847 4.3e-07 59.7 219 28.8
TPR.G26499 Trifolium pratense HOM05D001903 ORTHO05D001847 4.3e-07 59.7 212 29.7
ATR1120G200 Amborella trichopoda HOM05D001903 ORTHO05D001847 9.5e-07 58.5 231 27.7
Gohir.A06G055100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 9.5e-07 58.5 199 28.6
Mapoly0003s0253 Marchantia polymorpha HOM05D036240 ORTHO05D031199 9.5e-07 58.5 63 49.2
Duzib150G0453 Durio zibethinus HOM05D001903 ORTHO05D001847 1.2e-06 58.2 98 35.7
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.2e-06 58.2 57 47.4
A10p19730 Brassica napus HOM05D001903 ORTHO05D001847 1.6e-06 57.8 199 28.1
ECA240G1246 Erigeron canadensis HOM05D001903 ORTHO05D001847 1.6e-06 57.8 123 30.1
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 1.6e-06 57.8 159 30.8
unitig_699.g19788 Utricularia gibba HOM05D006310 ORTHO05D007768 2.1e-06 57.4 40 62.5
Ciclev10009202m.g Citrus clementina HOM05D001903 ORTHO05D001847 2.8e-06 57.0 64 45.3
Thhalv10014275m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 2.8e-06 57.0 205 30.2
Gohir.D06G054100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 3.6e-06 56.6 214 28.0
SEGI_05294 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 3.6e-06 56.6 64 48.4
Aa31LG4G420 Aethionema arabicum HOM05D001903 ORTHO05D001847 4.7e-06 56.2 77 42.9
Sc08g0006520 Simmondsia chinensis HOM05D001903 ORTHO05D001847 4.7e-06 56.2 46 54.3
SGA_v2.0_scaffold5G02688 Striga asiatica HOM05D001903 ORTHO05D001847 4.7e-06 56.2 220 30.0
unitig_52.g17457 Utricularia gibba HOM05D001903 ORTHO05D001847 4.7e-06 56.2 41 61.0
arahy.Tifrunner.gnm1.ann1.6P54CG Arachis hypogaea HOM05D001903 ORTHO05D001847 6.2e-06 55.8 59 49.2
Sp6g24210 Schrenkiella parvula HOM05D001903 ORTHO05D001847 6.2e-06 55.8 200 28.5
SEGI_00832 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 6.2e-06 55.8 35 68.6
CSS0008952 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 8.0e-06 55.5 75 42.7
Migut.D01072 Erythranthe guttata HOM05D001903 ORTHO05D001847 8.0e-06 55.5 59 50.8
Glyma.13G365300 Glycine max HOM05D001903 ORTHO05D001847 8.0e-06 55.5 117 33.3
PSO170G5882 Papaver somniferum HOM05D001903 ORTHO05D001847 8.0e-06 55.5 71 42.3


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