Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006915 Camellia sinensis var. sinensis HOM05D021861 ORTHO05D024722 4.2e-157 558.5 407 100.0
CSS0023810 Camellia sinensis var. sinensis HOM05D021861 ORTHO05D024722 1.4e-91 340.9 415 60.2
CSS0012698 Camellia sinensis var. sinensis HOM05D021861 ORTHO05D024722 4.2e-77 292.7 405 59.5
Dinv16885 Davidia involucrata HOM05D021861 ORTHO05D024722 2.5e-13 80.9 166 33.1
CSS0019117 Camellia sinensis var. sinensis HOM05D021861 ORTHO05D024722 3.7e-12 77.0 93 50.5
CSS0049062 Camellia sinensis var. sinensis HOM05D011745 ORTHO05D012903 6.5e-09 66.2 61 59.0
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 8.4e-09 65.9 121 33.1
Hma1.2p1_0502F.1_g167920 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 2.5e-08 64.3 114 35.1
Actinidia21630 Actinidia chinensis HOM05D000480 ORTHO05D000313 9.3e-08 62.4 131 29.0
Actinidia01028 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.6e-07 61.6 162 29.0
Manes.09G064501 Manihot esculenta HOM05D000480 ORTHO05D000313 1.0e-06 58.9 163 32.5
Actinidia25362 Actinidia chinensis HOM05D000480 ORTHO05D000313 1.3e-06 58.5 142 28.9
Gorai.011G252700 Gossypium raimondii HOM05D000480 ORTHO05D000313 1.8e-06 58.2 161 27.3
Manes.09G064600 Manihot esculenta HOM05D000480 ORTHO05D000313 1.8e-06 58.2 129 34.1
Hma1.2p1_2284F.1_g318890 Hydrangea macrophylla HOM05D000448 ORTHO05D000313 5.1e-06 56.6 94 29.8


User provided reference genes

Program Settings