Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.0e-179 630.2 327 100.0
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.2e-172 607.1 328 97.6
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 9.4e-144 513.8 323 84.2
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.7e-135 485.0 333 74.2
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.0e-130 469.5 323 74.6
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 5.5e-128 461.5 323 73.7
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 7.2e-128 461.1 328 71.3
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.1e-127 459.5 323 71.8
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 9.8e-125 450.7 323 70.9
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 9.8e-125 450.7 323 69.3
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 1.3e-124 450.3 320 71.6
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 1.7e-124 449.9 321 71.3
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.2e-124 449.5 324 70.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 2.8e-124 449.1 327 69.7
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.8e-124 449.1 320 71.6
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 8.3e-124 447.6 323 70.9
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.8e-123 446.4 322 69.3
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 3.2e-123 445.7 362 68.5
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 3.5e-122 442.2 322 68.3
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.0e-121 440.7 330 69.1
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 3.9e-121 438.7 310 71.3
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.9e-121 438.7 322 68.3
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 6.6e-121 438.0 319 70.5
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 6.6e-121 438.0 321 68.2
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 8.6e-121 437.6 321 70.4
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 2.5e-120 436.0 320 69.7
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.5e-120 436.0 321 68.5
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 2.5e-120 436.0 317 71.9
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 4.3e-120 435.3 321 68.8
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 4.7e-119 431.8 328 68.3
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.0e-118 430.6 321 68.2
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.8e-118 429.9 321 68.5
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 2.3e-118 429.5 319 68.3
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 3.1e-118 429.1 322 68.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 4.0e-118 428.7 322 68.6
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 4.0e-118 428.7 310 71.6
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 5.2e-118 428.3 290 72.8
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 6.8e-118 427.9 326 68.7
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.5e-117 426.8 322 68.6
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.6e-117 426.0 321 68.2
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 4.4e-117 425.2 322 68.0
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 4.4e-117 425.2 329 65.3
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 5.8e-117 424.9 274 75.2
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 7.5e-117 424.5 300 71.7
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 9.8e-117 424.1 318 67.3
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.3e-116 423.7 319 67.4
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.7e-116 423.3 319 67.4
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.7e-116 423.3 306 71.2
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 3.7e-116 422.2 298 70.8
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 3.7e-116 422.2 327 67.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 4.9e-116 421.8 321 67.6
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 6.4e-116 421.4 324 66.0
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 8.3e-116 421.0 323 65.9
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 8.3e-116 421.0 311 68.5
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.1e-115 420.6 307 70.4
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.1e-115 420.6 321 66.4
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.4e-115 420.2 277 74.0
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 1.4e-115 420.2 312 67.0
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.9e-115 419.9 322 65.2
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.4e-115 419.5 323 65.6
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 4.1e-115 418.7 329 66.3
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 9.2e-115 417.5 294 73.5
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.2e-114 417.2 322 66.5
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.6e-114 416.8 325 65.8
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 4.6e-114 415.2 294 70.7
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 6.0e-114 414.8 254 78.3
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 1.7e-113 413.3 330 67.0
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.3e-113 412.9 254 78.0
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.1e-112 410.6 319 66.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 3.3e-112 409.1 334 63.5
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 3.3e-112 409.1 279 71.3
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 3.4e-109 399.1 341 61.6
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 8.3e-108 394.4 277 71.1
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.4e-107 393.7 294 67.7
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 6.0e-106 388.3 341 61.3
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.3e-105 387.1 237 80.2
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 1.5e-104 383.6 272 68.8
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.9e-104 383.3 296 65.5
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.9e-104 383.3 323 62.8
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 5.6e-104 381.7 288 66.7
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 2.8e-103 379.4 296 65.9
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.1e-102 377.5 306 66.3
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.4e-102 377.1 236 75.0
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 5.8e-101 371.7 268 70.9
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.9e-100 369.4 237 76.4
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.4e-99 366.3 234 75.6
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 2.4e-99 366.3 295 68.5
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 9.2e-99 364.4 318 59.7
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 9.2e-99 364.4 303 61.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 1.3e-97 360.5 319 58.9
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 5.1e-97 358.6 320 58.8
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 6.6e-97 358.2 268 65.3
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.6e-93 346.3 212 79.7
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 4.4e-93 345.5 268 63.4
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 8.4e-92 341.3 212 75.5
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 7.1e-91 338.2 394 50.3
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.2e-90 337.4 278 64.7
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 5.6e-88 328.6 268 64.6
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 5.3e-78 295.4 290 52.8
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 2.3e-73 280.0 325 46.2
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.8e-70 270.4 243 56.8
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.8e-69 265.4 218 63.3
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 5.8e-69 265.4 325 46.8
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 6.5e-68 261.9 253 54.2
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 2.1e-63 246.9 249 51.0
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-62 244.6 129 95.3
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 5.5e-59 232.3 148 74.3
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 8.2e-55 218.4 277 44.4
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 1.0e-41 174.9 105 78.1
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 6.1e-34 149.1 88 85.2
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.8e-33 147.5 88 85.2
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.1e-30 135.2 81 84.0
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.8e-25 119.0 65 89.2
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.6e-24 117.1 64 90.6
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 5.9e-21 105.9 72 69.4
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.7e-15 87.8 261 28.0
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 1.2e-08 65.1 36 80.6
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 9.8e-08 62.0 35 80.0
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 2.4e-06 57.4 93 44.1


User provided reference genes

Program Settings