Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006902 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.4e-50 202.6 99 100.0
CSS0030282 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.4e-42 176.0 99 87.9
CSS0045024 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.4e-42 175.3 99 88.9
CSS0024915 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 5.6e-31 137.5 105 61.0
CSS0007993 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 7.3e-31 137.1 103 64.1
CSS0036156 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.3e-29 132.1 105 61.9
CSS0018071 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.3e-27 126.3 97 67.0
CSS0049668 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.4e-26 120.9 99 62.6
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-23 112.5 70 71.4
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-18 96.7 75 53.3
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.1e-18 94.7 76 53.9
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 7.0e-18 94.0 64 65.6
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.0e-17 90.9 76 53.9
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.8e-17 90.5 76 53.9
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.3e-16 89.7 77 50.6
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-16 89.4 77 50.6
CSS0044011 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 5.0e-16 87.8 77 50.6
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.6e-16 87.0 77 49.4
CSS0011923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-15 86.7 75 53.3
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-15 86.7 64 64.1
CSS0035157 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 4.3e-15 84.7 77 50.6
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.6e-15 84.3 77 48.1
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.5e-15 83.6 74 50.0
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-14 82.4 64 62.5
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-14 81.6 77 48.1
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.7e-14 81.3 77 46.8
CSS0013840 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.2e-14 80.9 77 48.1
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-13 80.1 77 46.8
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.1e-13 78.6 77 46.8
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.9e-13 77.0 72 48.6
CSS0037277 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.9e-12 73.6 69 47.8
CSS0049674 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-11 72.0 72 48.6
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-11 71.6 47 61.7
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.7e-11 71.6 68 47.1
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.1e-10 70.1 90 36.7
Manes.16G057209 Manihot esculenta HOM05D000003 ORTHO05D000006 5.4e-10 67.8 77 42.9
CSS0028753 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.2e-09 66.6 71 47.9
CSS0039230 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 61 49.2
PSO782G3597 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-09 66.6 87 35.6
Gohir.A08G056950 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.1e-09 65.9 82 40.2
SEGI_30676 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.7e-09 65.5 77 42.9
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.5e-09 65.1 74 37.8
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 4.6e-09 64.7 79 35.4
CiPaw.12G024400 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.8e-09 63.9 78 35.9
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.8e-09 63.9 79 39.2
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 1.0e-08 63.5 77 39.0
CSS0042274 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.0e-08 63.5 63 49.2
Lj1g0006455 Lotus japonicus HOM05D000003 ORTHO05D000006 1.3e-08 63.2 77 32.5
CSS0041570 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-08 62.8 46 56.5
Hund12149 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.0e-08 62.0 71 42.3
CSS0007116 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.9e-08 61.6 50 48.0
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-08 61.6 74 35.1
PSO017G7364 Papaver somniferum HOM05D000003 ORTHO05D000006 3.9e-08 61.6 75 38.7
CSS0019901 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.1e-08 61.2 47 51.1
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-08 61.2 74 36.5
Glyma.06G180900 Glycine max HOM05D000003 ORTHO05D000006 5.1e-08 61.2 75 38.7
PSO170G4394 Papaver somniferum HOM05D000003 ORTHO05D000006 5.1e-08 61.2 79 36.7
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-08 60.8 71 42.3
CSS0038659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.6e-08 60.8 72 43.1
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.6e-08 60.8 74 36.5
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.6e-08 60.8 96 31.2
CiPaw.12G097200 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.6e-08 60.8 74 37.8
Medtr7g057470 Medicago truncatula HOM05D000003 ORTHO05D000006 6.6e-08 60.8 75 40.0
Medtr7g057490 Medicago truncatula HOM05D000003 ORTHO05D000006 6.6e-08 60.8 75 40.0
SEGI_29986 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 6.6e-08 60.8 89 36.0
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.6e-08 60.5 88 35.2
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.6e-08 60.5 88 35.2
Gohir.A09G018865 Gossypium hirsutum HOM05D000003 ORTHO05D000006 8.6e-08 60.5 75 42.7
SEGI_23803 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.6e-08 60.5 84 36.9
SEGI_38982 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.6e-08 60.5 74 32.4
SEGI_40165 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.6e-08 60.5 76 42.1
CSS0028435 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-07 60.1 90 31.1
Gohir.A13G074451 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.1e-07 60.1 82 36.6
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 1.1e-07 60.1 76 32.9
Aqoxy6G00553 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.5e-07 59.7 78 33.3
CSS0013558 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-07 59.7 75 37.3
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.5e-07 59.7 74 35.1
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.5e-07 59.7 80 38.8
COL.COLO4_28775 Corchorus olitorius HOM05D008263 ORTHO05D009583 1.5e-07 59.7 74 36.5
Gohir.A07G004100 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.5e-07 59.7 75 38.7
Nitab4.5_0000563g0240 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.5e-07 59.7 82 34.1
Hund30486 Selenicereus undatus HOM05D001165 ORTHO05D000006 1.5e-07 59.7 71 40.8
SEGI_25431 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 76 40.8
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 1.5e-07 59.7 75 33.3
Hma1.2p1_0057F.1_g032280 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 1.9e-07 59.3 78 37.2
PSO017G1919 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-07 59.3 79 32.9
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.5e-07 58.9 74 32.4
PSO063G3697 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 75 30.7
PSO302G0244 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 79 32.9
PSO832G2789 Papaver somniferum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 89 28.1
SEGI_03753 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 3.3e-07 58.5 85 43.5
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 4.3e-07 58.2 73 42.5
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.3e-07 58.2 74 35.1
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.3e-07 58.2 74 35.1
HanXRQChr04g0113211 Helianthus annuus HOM05D000003 ORTHO05D000004 4.3e-07 58.2 52 44.2
Oeu002628.1 Olea europaea HOM05D000003 ORTHO05D000006 4.3e-07 58.2 74 35.1
SEGI_07271 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.3e-07 58.2 76 40.8
SEGI_10243 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.3e-07 58.2 79 39.2
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-07 57.8 82 34.1
PSO782G5504 Papaver somniferum HOM05D000003 ORTHO05D000006 5.6e-07 57.8 73 38.4
Hund15412 Selenicereus undatus HOM05D000003 ORTHO05D000006 5.6e-07 57.8 77 31.2
CSS0000975 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.3e-07 57.4 52 51.9
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.3e-07 57.4 79 32.9
MBI19_g24071_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.3e-07 57.4 74 37.8
Medtr0032s0090 Medicago truncatula HOM05D000003 ORTHO05D000006 7.3e-07 57.4 72 38.9
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 7.3e-07 57.4 71 35.2
Thecc.01G281100 Theobroma cacao HOM05D015720 ORTHO05D000006 7.3e-07 57.4 72 29.2
Atru.chr8.635 Acer truncatum HOM05D000003 ORTHO05D000006 9.5e-07 57.0 75 41.3
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.5e-07 57.0 74 33.8
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.5e-07 57.0 74 35.1
Duzib147G1219 Durio zibethinus HOM05D000003 ORTHO05D000006 9.5e-07 57.0 77 33.8
Duzib147G1313 Durio zibethinus HOM05D000003 ORTHO05D000006 9.5e-07 57.0 77 33.8
Medtr7g083690 Medicago truncatula HOM05D000003 ORTHO05D000004 9.5e-07 57.0 76 36.8
Hund13902 Selenicereus undatus HOM05D008000 ORTHO05D010275 9.5e-07 57.0 77 31.2
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.2e-06 56.6 91 31.9
Gohir.A06G194420 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 84 39.3
PSO017G1369 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 87 32.2
PSO063G2714 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 75 34.7
TPR.G35686 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-06 56.6 75 37.3
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-06 56.2 74 35.1
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-06 56.2 74 36.5
PSO063G5944 Papaver somniferum HOM05D000003 ORTHO05D000006 1.6e-06 56.2 80 32.5
Atru.chr3.2342 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 55.8 73 37.0
CSS0038624 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.1e-06 55.8 42 59.5
CSS0048386 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.1e-06 55.8 42 59.5
Cpa.g.sc54.17 Carica papaya HOM05D000003 ORTHO05D000006 2.1e-06 55.8 80 41.2
CiPaw.02G057800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-06 55.8 84 34.5
SEGI_18800 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.1e-06 55.8 76 39.5
SEGI_27905 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.1e-06 55.8 82 36.6
CiPaw.03G231100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.8e-06 55.5 74 31.1
CiPaw.08G116600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.8e-06 55.5 74 36.5
Lj6g0001957 Lotus japonicus HOM05D002777 ORTHO05D000006 2.8e-06 55.5 67 37.3
Medtr6g024380 Medicago truncatula HOM05D000003 ORTHO05D000004 2.8e-06 55.5 75 36.0
Prupe.6G046000 Prunus persica HOM05D000003 ORTHO05D000006 2.8e-06 55.5 73 35.6
QL03p046628 Quercus lobata HOM05D000003 ORTHO05D000006 2.8e-06 55.5 93 29.0
SEGI_02919 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.8e-06 55.5 76 42.1
SEGI_18291 Sequoiadendron giganteum HOM05D002752 ORTHO05D000006 2.8e-06 55.5 75 42.7
SEGI_30948 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.8e-06 55.5 75 37.3
SEGI_34811 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 2.8e-06 55.5 79 39.2
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-06 55.1 73 38.4
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-06 55.1 56 46.4
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-06 55.1 56 46.4
CiPaw.01G183000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-06 55.1 74 31.1
CiPaw.03G042600 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.6e-06 55.1 70 34.3
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 3.6e-06 55.1 67 41.8
Nitab4.5_0001615g0090 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.6e-06 55.1 82 31.7
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.6e-06 55.1 77 29.9
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 3.6e-06 55.1 75 37.3
Atru.chr2.1089 Acer truncatum HOM05D000003 ORTHO05D002259 4.7e-06 54.7 73 35.6
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-06 54.7 42 54.8
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 4.7e-06 54.7 97 32.0
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 4.7e-06 54.7 77 33.8
SEGI_14598 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.7e-06 54.7 80 41.2
SEGI_26719 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.7e-06 54.7 75 36.0
SEGI_34939 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 4.7e-06 54.7 78 43.6
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.2e-06 54.3 74 32.4
CiPaw.04G081300 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.2e-06 54.3 74 35.1
PSO339G1341 Papaver somniferum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 80 30.0
PSO724G1127 Papaver somniferum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 79 34.2
PSO832G3822 Papaver somniferum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 73 38.4
Hund21125 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.2e-06 54.3 77 31.2
SEGI_31673 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 75 37.3
SEGI_33730 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 6.2e-06 54.3 89 34.8
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-06 53.9 77 35.1
Cpa.g.sc96.61 Carica papaya HOM05D035046 ORTHO05D000006 8.1e-06 53.9 79 39.2
SEGI_23925 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.1e-06 53.9 75 37.3
SEGI_30131 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.1e-06 53.9 76 40.8
SEGI_35957 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 8.1e-06 53.9 88 34.1
SEGI_40390 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 8.1e-06 53.9 83 33.7


User provided reference genes

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