Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006899 Camellia sinensis var. sinensis HOM05D003557 ORTHO05D001267 3.5e-256 887.9 475 100.0
Actinidia29515 Actinidia chinensis HOM05D003557 ORTHO05D001267 7.1e-108 395.2 474 57.0
Actinidia03451 Actinidia chinensis HOM05D003557 ORTHO05D001267 8.7e-90 335.1 461 52.5
Dinv25812 Davidia involucrata HOM05D003557 ORTHO05D001267 9.7e-81 305.1 306 53.9
TAR625G0023 Trochodendron aralioides HOM05D003557 ORTHO05D001267 2.6e-49 200.7 490 33.1
TAR628G1562 Trochodendron aralioides HOM05D003557 ORTHO05D001267 1.3e-48 198.4 562 30.6
Oeu000781.1 Olea europaea HOM05D003557 ORTHO05D001267 1.0e-42 178.7 456 36.0
Nn5g28628 Nelumbo nucifera HOM05D003557 ORTHO05D001267 4.0e-42 176.8 543 28.5
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 1.7e-40 171.4 469 40.3
TAR376G0938 Trochodendron aralioides HOM05D003557 ORTHO05D001267 2.7e-38 164.1 542 29.7
DCAR_010881 Daucus carota HOM05D003557 ORTHO05D001267 2.5e-36 157.5 538 33.3
PGSC0003DMG400024801 Solanum tuberosum HOM05D003557 ORTHO05D001267 8.9e-34 149.1 227 37.9
Actinidia01137 Actinidia chinensis HOM05D003557 ORTHO05D001267 1.3e-32 145.2 151 48.3
Lj4A691T76 Lonicera japonica HOM05D003557 ORTHO05D001267 1.4e-31 141.7 334 32.0
Nitab4.5_0005978g0020 Nicotiana tabacum HOM05D003557 ORTHO05D001267 4.1e-31 140.2 192 39.1
Nitab4.5_0000299g0110 Nicotiana tabacum HOM05D003557 ORTHO05D001267 5.4e-31 139.8 192 39.6
CAN.G744.17 Capsicum annuum HOM05D003557 ORTHO05D001267 1.6e-30 138.3 227 35.2
Sopen04g026740 Solanum pennellii HOM05D003557 ORTHO05D001267 8.6e-29 132.5 225 34.2
Oeu007015.1 Olea europaea HOM05D003557 ORTHO05D001267 1.1e-28 132.1 388 29.6
Solyc04g064770.1 Solanum lycopersicum HOM05D003557 ORTHO05D001267 1.5e-28 131.7 225 33.8
Cfa002823 Carpinus fangiana HOM05D003557 ORTHO05D001267 4.3e-28 130.2 493 30.2
MBI06_g18871_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 5.6e-28 129.8 515 27.0
EL10Ac6g15275 Beta vulgaris HOM05D003557 ORTHO05D001267 3.6e-27 127.1 501 26.1
Cc00_g20050 Coffea canephora HOM05D003557 ORTHO05D001267 1.8e-26 124.8 481 34.7
MSTRG.1373 Avicennia marina HOM05D003557 ORTHO05D001267 3.0e-26 124.0 445 34.8
Dinv24328 Davidia involucrata HOM05D003557 ORTHO05D001267 1.2e-25 122.1 455 28.8
AUR62003603 Chenopodium quinoa HOM05D003557 ORTHO05D001267 4.4e-25 120.2 464 25.4
Prupe.6G159100 Prunus persica HOM05D003557 ORTHO05D001267 1.7e-24 118.2 467 28.3
CiPaw.03G128800 Carya illinoinensis HOM05D003557 ORTHO05D001267 6.4e-24 116.3 470 31.1
SalBow6G6261 Salvia bowleyana HOM05D003557 ORTHO05D001267 1.4e-23 115.2 285 31.9
MBI03_g11313_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 1.9e-23 114.8 399 30.3
AUR62017914 Chenopodium quinoa HOM05D003557 ORTHO05D001267 4.1e-23 113.6 399 26.6
Manes.12G153500 Manihot esculenta HOM05D003557 ORTHO05D001267 1.2e-22 112.1 425 32.0
Peaxi162Scf00263g00317 Petunia axillaris HOM05D003557 ORTHO05D001267 1.2e-22 112.1 524 28.1
Aqoxy5G02196 Aquilegia oxysepala HOM05D003557 ORTHO05D001267 1.6e-22 111.7 526 31.6
Sabra07G0088300 Salix brachista HOM05D003557 ORTHO05D001267 2.0e-22 111.3 439 30.1
Hund04477 Selenicereus undatus HOM05D003557 ORTHO05D001267 2.0e-22 111.3 415 29.9
PSO063G0467 Papaver somniferum HOM05D003557 ORTHO05D001267 4.6e-22 110.2 513 26.7
PSO782G0500 Papaver somniferum HOM05D003557 ORTHO05D001267 1.7e-21 108.2 521 26.7
Migut.C01037 Erythranthe guttata HOM05D003557 ORTHO05D001267 3.0e-21 107.5 427 24.8
Sopen04g026760 Solanum pennellii HOM05D003557 ORTHO05D001267 5.0e-21 106.7 159 39.0
Migut.N03235 Erythranthe guttata HOM05D003557 ORTHO05D001267 1.1e-20 105.5 369 35.5
Potri.005G061100 Populus trichocarpa HOM05D003557 ORTHO05D001267 1.5e-20 105.1 439 29.8
Ah.03g146750 Amaranthus hybridus HOM05D003557 ORTHO05D001267 7.3e-20 102.8 520 26.9
Solyc04g064800.4 Solanum lycopersicum HOM05D003557 ORTHO05D001267 1.2e-19 102.1 159 37.7
CANSAT01G1165 Cannabis sativa HOM05D003557 ORTHO05D001267 3.6e-19 100.5 437 30.0
QL06p029317 Quercus lobata HOM05D003557 ORTHO05D001267 8.0e-19 99.4 497 28.8
Gorai.003G068000 Gossypium raimondii HOM05D003557 ORTHO05D001267 1.1e-18 99.0 413 30.3
Sabra05G0051500 Salix brachista HOM05D003557 ORTHO05D001267 1.1e-18 99.0 371 26.7
TWI31G0955 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 1.1e-18 99.0 266 29.7
Potri.007G107800 Populus trichocarpa HOM05D003557 ORTHO05D001267 2.3e-18 97.8 432 29.4
MD01G1013400 Malus domestica HOM05D003557 ORTHO05D001267 5.2e-18 96.7 277 29.2
MD15G1337600 Malus domestica HOM05D003557 ORTHO05D001267 2.0e-17 94.7 472 26.5
TWI75G1801 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 2.6e-17 94.4 414 27.8
Gohir.A11G227304 Gossypium hirsutum HOM05D003557 ORTHO05D001267 2.9e-16 90.9 364 32.1
Ca_17647_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 1.9e-15 88.2 312 28.8
Phvul.009G149100 Phaseolus vulgaris HOM05D003557 ORTHO05D001267 2.4e-15 87.8 430 24.7
COL.COLO4_14021 Corchorus olitorius HOM05D003557 ORTHO05D001267 3.2e-15 87.4 304 29.3
Duzib160G0654 Durio zibethinus HOM05D003557 ORTHO05D001267 1.2e-14 85.5 343 32.9
Thecc.01G127600 Theobroma cacao HOM05D003557 ORTHO05D001267 1.2e-14 85.5 390 30.3
CsaV3_6G041740 Cucumis sativus L. HOM05D003557 ORTHO05D001267 4.6e-14 83.6 507 28.2
Gohir.D02G108001 Gossypium hirsutum HOM05D003557 ORTHO05D001267 4.6e-14 83.6 243 29.2
arahy.Tifrunner.gnm1.ann1.J2NKIW Arachis hypogaea HOM05D003557 ORTHO05D001267 6.0e-14 83.2 313 27.8
Gorai.005G122500 Gossypium raimondii HOM05D003557 ORTHO05D001267 7.8e-14 82.8 243 29.2
Haze_25122 Corylus avellana HOM05D003557 ORTHO05D001267 1.7e-13 81.6 484 26.0
Duzib187G0404 Durio zibethinus HOM05D003557 ORTHO05D001267 3.0e-13 80.9 365 29.9
Cpa.g.sc42.122 Carica papaya HOM05D003557 ORTHO05D001267 3.9e-13 80.5 131 35.9
Rhsim10G0136700 Rhododendron simsii HOM05D003557 ORTHO05D001267 3.9e-13 80.5 226 30.1
Duzib147G0862 Durio zibethinus HOM05D003557 ORTHO05D001267 6.6e-13 79.7 371 30.2
Lj4g0000833 Lotus japonicus HOM05D003557 ORTHO05D001267 8.6e-13 79.3 315 27.9
unitig_52.g17537 Utricularia gibba HOM05D003557 ORTHO05D001267 8.6e-13 79.3 357 35.3
HPP92_013320 Vanilla planifolia HOM05D003557 ORTHO05D001267 1.1e-12 79.0 194 30.4
RcHm_v2.0_Chr2g0120281 Rosa chinensis HOM05D003557 ORTHO05D001267 1.5e-12 78.6 402 28.6
MELO3C008046.2 Cucumis melo HOM05D003557 ORTHO05D001267 2.5e-12 77.8 506 26.7
Lalb_Chr11g0068351 Lupinus albus HOM05D003557 ORTHO05D001267 2.5e-12 77.8 341 27.9
FAN28G2033 Fragaria x ananassa HOM05D003557 ORTHO05D001267 4.3e-12 77.0 203 30.0
Atru.chr4.835 Acer truncatum HOM05D003557 ORTHO05D001267 1.2e-11 75.5 386 29.8
Sc07g0001690 Simmondsia chinensis HOM05D003557 ORTHO05D001267 2.1e-11 74.7 198 29.3
Glyma.04G214200 Glycine max HOM05D003557 ORTHO05D001267 4.7e-11 73.6 517 23.6
Lj2A603T36 Lonicera japonica HOM05D003557 ORTHO05D001267 6.2e-11 73.2 381 25.5
Sed0024902 Sechium edule HOM05D003557 ORTHO05D001267 6.2e-11 73.2 510 28.0
ClCG01G015510 Citrullus lanatus HOM05D003557 ORTHO05D001267 8.1e-11 72.8 507 26.0
FvH4_1g24100 Fragaria vesca HOM05D003557 ORTHO05D001267 8.1e-11 72.8 415 28.0
FAN19G1884 Fragaria x ananassa HOM05D003557 ORTHO05D001267 8.1e-11 72.8 415 28.0
Os08g0135800 Oryza sativa ssp. japonica HOM05D003557 ORTHO05D001267 8.1e-11 72.8 172 31.4
ECA246G4840 Erigeron canadensis HOM05D003557 ORTHO05D001267 1.8e-10 71.6 152 32.2
FAN26G1648 Fragaria x ananassa HOM05D003557 ORTHO05D001267 1.8e-10 71.6 416 26.7
Lalb_Chr23g0272561 Lupinus albus HOM05D003557 ORTHO05D001267 3.1e-10 70.9 350 23.4
VMungo0647G1249 Vigna mungo HOM05D003557 ORTHO05D001267 3.1e-10 70.9 485 22.5
Rhsim10G0136500 Rhododendron simsii HOM05D003557 ORTHO05D001267 4.0e-10 70.5 414 24.6
Ca_16932_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 5.2e-10 70.1 363 27.5
FAN23G1052 Fragaria x ananassa HOM05D003557 ORTHO05D001267 1.2e-09 68.9 416 27.9
unitig_62.g23527 Utricularia gibba HOM05D003557 ORTHO05D001267 3.4e-09 67.4 105 35.2
Lalb_Chr07g0184471 Lupinus albus HOM05D003557 ORTHO05D001267 7.5e-09 66.2 466 21.7
Gohir.A11G227302 Gossypium hirsutum HOM05D003557 ORTHO05D001267 2.2e-08 64.7 494 22.3
ATR1136G179 Amborella trichopoda HOM05D003557 ORTHO05D001267 4.9e-08 63.5 106 40.6
Glyma.06G152200 Glycine max HOM05D003557 ORTHO05D001267 8.3e-08 62.8 418 24.6
HanXRQChr08g0232591 Helianthus annuus HOM05D003557 ORTHO05D001267 4.1e-07 60.5 117 37.6
Zm00001eb417000 Zea mays HOM05D003557 ORTHO05D001267 2.1e-06 58.2 196 30.1
ECA232G2971 Erigeron canadensis HOM05D003557 ORTHO05D001267 3.5e-06 57.4 138 31.2


User provided reference genes

Program Settings