Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 3.6e-132 474.9 243 100.0
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 5.8e-130 467.6 246 98.4
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.5e-69 266.9 246 64.2
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 2.2e-65 253.1 253 59.3
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 9.7e-61 237.7 251 57.8
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.8e-59 233.4 220 63.6
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 1.7e-44 183.7 212 48.6
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 6.3e-44 181.8 249 48.2
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 3.5e-42 176.0 199 54.8
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 4.5e-42 175.6 246 45.9
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.9e-40 170.2 199 53.8
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.9e-40 170.2 194 51.0
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 3.2e-40 169.5 199 52.3
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 7.2e-40 168.3 247 47.0
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 9.4e-40 167.9 249 47.0
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 2.1e-39 166.8 250 44.0
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.0e-38 162.9 206 45.6
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 8.8e-38 161.4 248 43.1
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 1.2e-37 161.0 246 42.3
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.6e-37 159.8 218 45.9
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 2.6e-37 159.8 218 45.9
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 3.4e-37 159.5 245 43.3
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 3.4e-37 159.5 255 42.4
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 4.4e-37 159.1 245 43.3
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 1.8e-35 153.7 220 42.7
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.8e-35 153.7 218 44.0
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 2.4e-35 153.3 193 48.2
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.1e-35 152.9 209 42.6
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.1e-35 152.5 252 43.3
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 4.1e-35 152.5 252 43.3
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.0e-34 150.2 211 46.0
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 2.7e-34 149.8 211 47.4
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 2.7e-34 149.8 193 47.2
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 4.5e-34 149.1 203 48.3
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 7.7e-34 148.3 210 46.7
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.7e-33 147.1 216 43.1
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 2.2e-33 146.7 221 46.2
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 4.2e-32 142.5 194 42.3
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 7.2e-32 141.7 198 47.0
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 7.2e-32 141.7 193 46.1
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 2.7e-31 139.8 199 47.2
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.7e-31 139.8 205 44.9
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 3.6e-31 139.4 229 42.8
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.0e-30 137.9 194 46.9
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 5.2e-30 135.6 248 40.3
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 8.8e-30 134.8 195 46.2
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 2.6e-29 133.3 216 43.5
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.3e-28 131.0 197 44.7
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.3e-28 131.0 197 45.2
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 2.2e-28 130.2 200 46.0
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 2.8e-28 129.8 202 46.5
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-27 127.9 131 57.3
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.4e-27 127.5 242 38.8
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.8e-27 127.1 208 43.3
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 2.4e-27 126.7 257 37.4
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 3.1e-27 126.3 194 41.8
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 9.1e-27 124.8 266 37.2
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.2e-26 124.4 234 42.3
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 1.6e-26 124.0 217 41.5
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 3.5e-26 122.9 194 40.7
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 4.5e-26 122.5 172 40.7
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.3e-25 120.2 223 39.5
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 2.3e-25 120.2 218 39.4
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 2.9e-25 119.8 196 44.9
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 5.0e-25 119.0 221 40.7
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 1.5e-24 117.5 198 42.4
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.9e-24 117.1 200 39.5
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 9.5e-24 114.8 144 47.9
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 3.6e-23 112.8 229 37.6
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.7e-23 112.5 184 38.0
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.3e-22 110.2 215 39.1
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 6.8e-22 108.6 134 50.7
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 2.2e-20 103.6 230 36.5
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 4.9e-20 102.4 169 42.0
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 3.2e-19 99.8 251 36.3
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 9.2e-19 98.2 256 32.8
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.2e-18 97.8 162 42.6
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 3.5e-18 96.3 205 32.7
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.0e-17 94.7 198 33.8
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 3.9e-17 92.8 162 38.3
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 3.9e-17 92.8 199 38.7
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.9e-17 92.8 215 34.9
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 6.6e-17 92.0 207 36.7
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 7.3e-16 88.6 161 37.3
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 7.3e-16 88.6 198 37.4
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 7.3e-16 88.6 213 33.3
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 4.7e-15 85.9 216 32.4
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 3.1e-14 83.2 142 40.8
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 5.2e-14 82.4 164 32.9
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 1.2e-13 81.3 227 33.9
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 3.4e-13 79.7 205 38.0
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 4.4e-13 79.3 178 34.3
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 2.9e-12 76.6 256 31.2
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 4.9e-12 75.9 216 33.8
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 4.9e-12 75.9 244 29.9
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 1.1e-11 74.7 187 34.2
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 2.4e-11 73.6 156 32.1
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 7.0e-11 72.0 152 30.9
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 1.6e-10 70.9 118 39.0
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.6e-10 69.3 121 38.0
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 4.6e-10 69.3 246 28.9
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 2.3e-09 67.0 227 30.0
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 1.1e-08 64.7 134 35.8
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 2.5e-08 63.5 127 38.6
ECA247G1060 Erigeron canadensis HOM05D051946 ORTHO05D008965 3.3e-08 63.2 142 38.7
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 3.1e-06 56.6 188 32.4
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 5.2e-06 55.8 50 54.0
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 6.8e-06 55.5 192 31.2


User provided reference genes

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