Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006850 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D113438 2.6e-37 158.3 85 100.0
CSS0029094 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D006772 4.8e-31 137.5 75 98.7
CSS0019861 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D109039 2.4e-14 82.0 54 85.2
Dinv23541 Davidia involucrata HOM05D000274 ORTHO05D006772 2.5e-11 72.0 78 55.1
Dinv42081 Davidia involucrata HOM05D000274 ORTHO05D006772 2.5e-11 72.0 70 64.3
Cfa005020 Carpinus fangiana HOM05D000274 ORTHO05D006772 2.7e-10 68.6 75 57.3
Thecc.02G124100 Theobroma cacao HOM05D000274 ORTHO05D006772 4.6e-10 67.8 75 53.3
Haze_02369 Corylus avellana HOM05D000274 ORTHO05D006772 6.1e-10 67.4 75 56.0
CSS0011486 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D109505 7.9e-10 67.0 76 60.5
CsaV3_2G014590 Cucumis sativus L. HOM05D000274 ORTHO05D006772 3.9e-09 64.7 70 54.3
QL11p042591 Quercus lobata HOM05D000274 ORTHO05D006772 3.9e-09 64.7 70 57.1
ClCG11G004510 Citrullus lanatus HOM05D000274 ORTHO05D006772 1.1e-08 63.2 70 52.9
Ciclev10029044m.g Citrus clementina HOM05D000274 ORTHO05D006772 1.1e-08 63.2 70 58.6
COL.COLO4_32437 Corchorus olitorius HOM05D000274 ORTHO05D006772 1.5e-08 62.8 75 52.0
Atru.chr5.2991 Acer truncatum HOM05D000274 ORTHO05D006772 1.9e-08 62.4 80 50.0
Gorai.012G145900 Gossypium raimondii HOM05D000274 ORTHO05D006772 2.5e-08 62.0 75 48.0
QL11p043210 Quercus lobata HOM05D000274 ORTHO05D006772 3.3e-08 61.6 70 55.7
CiPaw.05G063000 Carya illinoinensis HOM05D000274 ORTHO05D006772 5.7e-08 60.8 70 55.7
Gohir.A04G116800 Gossypium hirsutum HOM05D000274 ORTHO05D006772 5.7e-08 60.8 75 48.0
Gohir.D02G202819 Gossypium hirsutum HOM05D000274 ORTHO05D006772 9.7e-08 60.1 70 50.0
Gohir.D04G158400 Gossypium hirsutum HOM05D000274 ORTHO05D006772 9.7e-08 60.1 75 46.7
Hma1.2p1_1375F.1_g279000 Hydrangea macrophylla HOM05D000274 ORTHO05D006772 1.7e-07 59.3 75 49.3
Hma1.2p1_3179F.1_g333685 Hydrangea macrophylla HOM05D000274 ORTHO05D006772 1.7e-07 59.3 75 49.3
MELO3C020985.2 Cucumis melo HOM05D000274 ORTHO05D006772 4.8e-07 57.8 70 50.0
Gorai.005G228000 Gossypium raimondii HOM05D000274 ORTHO05D006772 4.8e-07 57.8 70 48.6
QL03p043522 Quercus lobata HOM05D000274 ORTHO05D006772 4.8e-07 57.8 72 54.2
Prupe.8G061700 Prunus persica HOM05D000274 ORTHO05D006772 6.3e-07 57.4 68 55.9
Rhsim05G0075000 Rhododendron simsii HOM05D000274 ORTHO05D006772 6.3e-07 57.4 75 53.3
Sed0001211 Sechium edule HOM05D000274 ORTHO05D006772 2.4e-06 55.5 70 48.6
Cpa.g.sc62.130 Carica papaya HOM05D000274 ORTHO05D006772 4.1e-06 54.7 72 50.0
Gohir.A03G179200 Gossypium hirsutum HOM05D000274 ORTHO05D006772 9.1e-06 53.5 70 45.7
Manes.14G074700 Manihot esculenta HOM05D000274 ORTHO05D006772 9.1e-06 53.5 70 45.7


User provided reference genes

Program Settings