Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006842 Camellia sinensis var. sinensis HOM05D007456 ORTHO05D009411 3.6e-93 345.5 267 100.0
AT5G36300 Arabidopsis thaliana HOM05D007456 ORTHO05D009411 2.4e-36 156.8 190 44.2
AUR62005926 Chenopodium quinoa HOM05D007456 ORTHO05D009411 4.0e-23 112.8 136 44.9
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 1.5e-22 110.9 180 53.3
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 2.6e-22 110.2 136 45.6
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 4.4e-22 109.4 132 47.0
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 2.8e-21 106.7 75 68.0
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 4.8e-21 105.9 136 41.2
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 1.8e-20 104.0 128 46.9
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.1e-20 103.2 100 54.0
FAN19G0065 Fragaria x ananassa HOM05D007456 ORTHO05D009411 4.1e-20 102.8 96 56.2
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 2.0e-19 100.5 85 60.0
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 2.0e-19 100.5 85 60.0
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 1.7e-18 97.4 76 67.1
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 9.4e-17 91.7 89 51.7
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 1.6e-16 90.9 123 43.1
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 2.1e-16 90.5 64 64.1
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 2.1e-16 90.5 64 64.1
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 2.7e-16 90.1 64 65.6
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 6.1e-16 89.0 176 48.3
Atru.BG.267.p Acer truncatum HOM05D007456 ORTHO05D009411 1.8e-15 87.4 64 65.6
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 4.0e-15 86.3 64 67.2
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 2.6e-14 83.6 119 43.7
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 9.8e-14 81.6 64 64.1
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 1.3e-13 81.3 64 64.1
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 1.7e-13 80.9 84 51.2
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 2.2e-13 80.5 109 42.2
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.8e-13 80.1 49 79.6
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.8e-13 80.1 49 79.6
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 4.8e-13 79.3 100 45.0
BcaC02g09522 Brassica carinata HOM05D007456 ORTHO05D009411 4.8e-13 79.3 138 36.2
Oeu026572.1 Olea europaea HOM05D007456 ORTHO05D009411 2.0e-11 73.9 126 38.1
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 3.5e-11 73.2 85 50.6
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 4.5e-11 72.8 43 83.7
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 1.3e-10 71.2 105 34.3
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 5.0e-10 69.3 90 41.1
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 1.9e-09 67.4 41 80.5
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 4.2e-09 66.2 87 39.1
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 5.5e-09 65.9 49 67.3
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 7.2e-09 65.5 87 40.2
HPP92_008361 Vanilla planifolia HOM05D007456 ORTHO05D009411 9.4e-09 65.1 42 73.8
Rhsim03G0219800 Rhododendron simsii HOM05D007456 ORTHO05D009411 1.6e-08 64.3 37 81.1
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 2.1e-08 63.9 87 41.4
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 3.6e-08 63.2 87 41.4
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 3.6e-08 63.2 87 41.4
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 4.7e-08 62.8 87 40.2
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 4.7e-08 62.8 87 40.2
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 6.1e-08 62.4 36 86.1
Aqoxy245s001 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 8.0e-08 62.0 103 34.0
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 1.4e-07 61.2 66 47.0
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 1.8e-07 60.8 67 50.7
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.8e-07 60.8 36 77.8
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.8e-07 60.8 36 77.8
CDE02G0006 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 6.8e-07 58.9 64 50.0
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 6.8e-07 58.9 115 33.0
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 1.2e-06 58.2 36 75.0
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 1.2e-06 58.2 83 38.6
Aqoxy3G00913 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 1.5e-06 57.8 42 64.3
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 4.4e-06 56.2 39 69.2
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 5.7e-06 55.8 59 42.4
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 7.5e-06 55.5 34 79.4


User provided reference genes

Program Settings