Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.2e-269 932.6 480 100.0
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 5.3e-228 794.3 480 86.2
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 3.4e-227 791.6 483 85.1
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 2.7e-224 781.9 483 84.7
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 2.7e-224 781.9 517 80.1
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 1.8e-215 752.7 477 80.9
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 1.8e-215 752.7 480 81.5
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 9.7e-214 746.9 479 79.3
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 2.2e-213 745.7 477 79.7
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 3.7e-213 745.0 481 80.7
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 2.4e-212 742.3 480 78.8
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.7e-211 737.3 479 78.3
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 1.0e-210 736.9 480 77.9
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.8e-210 734.9 479 78.3
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 6.5e-210 734.2 480 78.5
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 1.4e-209 733.0 481 78.0
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 9.4e-209 730.3 480 79.2
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 9.4e-209 730.3 480 79.0
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.6e-208 729.6 478 78.7
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 2.7e-208 728.8 480 78.1
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 4.7e-208 728.0 481 79.4
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 6.1e-208 727.6 481 78.6
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 8.0e-208 727.2 480 77.7
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 1.8e-207 726.1 480 76.7
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.8e-207 726.1 475 77.7
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.5e-206 723.0 477 76.3
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.0e-206 722.6 477 76.3
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 2.2e-205 719.2 480 78.1
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 8.2e-205 717.2 479 75.8
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.4e-204 716.5 480 77.5
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.8e-204 716.1 480 75.2
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 2.4e-204 715.7 480 77.5
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 1.2e-203 713.4 480 77.3
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 2.0e-203 712.6 477 78.0
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 1.0e-202 710.3 486 75.3
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 2.2e-202 709.1 480 76.9
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 2.2e-202 709.1 482 76.1
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 2.2e-202 709.1 486 75.1
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 6.5e-202 707.6 478 76.6
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.1e-201 706.8 479 74.5
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 1.1e-201 706.8 480 76.5
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 1.5e-201 706.4 486 74.7
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 1.5e-201 706.4 486 75.1
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.5e-201 706.4 476 76.1
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 2.5e-201 705.7 510 72.5
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 5.5e-201 704.5 480 75.6
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 5.5e-201 704.5 476 76.3
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 7.2e-201 704.1 476 76.3
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 7.2e-201 704.1 494 74.3
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 1.2e-200 703.4 480 76.9
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 4.7e-200 701.4 481 76.5
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 6.1e-200 701.0 480 77.3
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 8.0e-200 700.7 477 76.3
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 6.8e-199 697.6 480 75.6
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 8.8e-199 697.2 480 75.2
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 4.1e-196 688.3 480 75.0
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 5.9e-195 684.5 480 74.6
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.2e-194 682.6 479 72.9
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 8.5e-194 680.6 479 74.5
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 7.2e-193 677.6 480 73.3
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 3.6e-192 675.2 480 73.1
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 6.1e-192 674.5 478 74.1
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 8.0e-192 674.1 478 73.6
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 8.0e-192 674.1 534 68.5
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 1.0e-191 673.7 482 74.9
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 5.2e-191 671.4 481 72.6
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 3.4e-190 668.7 479 72.4
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 9.8e-190 667.2 441 80.5
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.7e-189 666.4 478 73.2
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 2.2e-189 666.0 479 72.4
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 1.4e-188 663.3 480 73.8
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 7.0e-188 661.0 480 70.6
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.7e-186 656.4 478 72.0
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 5.0e-186 654.8 421 79.3
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 7.2e-185 651.0 486 71.6
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 1.2e-184 650.2 478 70.3
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 2.8e-184 649.0 478 70.5
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 2.8e-184 649.0 478 70.5
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 2.8e-184 649.0 478 70.5
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 6.1e-184 647.9 479 73.1
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 1.0e-183 647.1 478 70.7
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 2.6e-182 642.5 478 70.9
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 6.3e-181 637.9 478 71.1
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.8e-180 636.3 478 70.9
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 2.4e-180 636.0 416 78.8
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 5.4e-180 634.8 478 69.9
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.9e-178 629.0 377 87.0
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 8.0e-176 620.9 474 72.2
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 1.4e-175 620.2 480 68.5
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.5e-174 616.7 470 69.8
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.0e-174 616.3 423 74.7
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 5.8e-174 614.8 481 68.0
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 2.8e-168 595.9 472 66.9
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 6.2e-168 594.7 490 64.9
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 3.1e-167 592.4 478 68.2
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.7e-165 586.6 480 65.6
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 6.6e-162 574.7 433 71.8
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 1.2e-160 570.5 372 79.8
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.6e-160 570.1 578 56.2
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 7.6e-158 561.2 383 74.4
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 3.2e-156 555.8 339 85.5
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 2.1e-152 543.1 379 72.8
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 7.8e-147 524.6 480 60.4
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 2.5e-145 519.6 484 58.9
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.9e-141 505.4 311 82.0
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 3.0e-138 496.1 809 41.4
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 3.3e-129 466.1 480 55.2
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.1e-127 461.1 316 75.6
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.6e-126 456.4 344 67.7
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 1.3e-120 437.6 450 55.6
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 9.0e-119 431.4 450 54.4
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 4.2e-116 422.5 448 53.1
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 4.6e-115 419.1 376 58.0
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.1e-113 414.5 450 53.6
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 8.2e-112 408.3 448 52.7
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 2.5e-108 396.7 450 51.6
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.7e-107 393.3 470 49.1
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 1.4e-106 391.0 450 50.9
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 2.8e-104 383.3 450 50.9
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 2.5e-100 370.2 368 55.2
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 2.5e-100 370.2 444 49.1
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 5.5e-100 369.0 367 54.8
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 5.1e-98 362.5 411 51.3
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 5.9e-94 349.0 229 76.9
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 7.7e-94 348.6 249 73.5
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 3.8e-93 346.3 406 50.0
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 7.2e-92 342.0 241 73.9
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 2.7e-91 340.1 491 42.8
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.0e-90 338.2 448 47.1
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 4.0e-90 336.3 252 72.6
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 2.4e-71 273.9 486 38.7
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.0e-53 215.3 308 42.9
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.1e-52 211.8 192 62.5
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 3.7e-48 196.8 203 52.7
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 7.1e-47 192.6 202 51.5
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.4e-41 173.7 106 81.1
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 1.7e-40 171.4 439 31.9
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 8.4e-40 169.1 102 83.3
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.1e-35 154.5 522 28.7
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.0e-17 94.7 91 52.7
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 8.4e-16 89.4 63 77.8
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 6.0e-14 83.2 143 36.4
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 3.2e-07 60.8 81 43.2
HanXRQChr01g0001151 Helianthus annuus HOM05D001663 ORTHO05D005717 2.1e-06 58.2 141 34.8


User provided reference genes

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