Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006818 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 2.4e-116 422.2 213 100.0
CSS0020159 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 2.2e-93 345.9 174 99.4
Actinidia27283 Actinidia chinensis HOM05D001695 ORTHO05D002735 1.1e-60 237.3 174 74.1
Dinv18744 Davidia involucrata HOM05D001695 ORTHO05D002735 1.9e-60 236.5 174 74.1
Migut.E00301 Erythranthe guttata HOM05D001695 ORTHO05D002735 2.1e-59 233.0 175 70.9
Nitab4.5_0000673g0210 Nicotiana tabacum HOM05D001695 ORTHO05D002735 1.4e-58 230.3 180 68.3
Rhsim07G0077100 Rhododendron simsii HOM05D001695 ORTHO05D002735 1.8e-58 229.9 175 72.0
DCAR_006556 Daucus carota HOM05D001695 ORTHO05D002735 3.9e-58 228.8 174 70.7
MSTRG.13709 Avicennia marina HOM05D001695 ORTHO05D002735 5.1e-58 228.4 174 70.1
Lj2A156T52 Lonicera japonica HOM05D001695 ORTHO05D002735 6.7e-58 228.0 174 71.3
FAN13G1073 Fragaria x ananassa HOM05D001695 ORTHO05D002735 8.8e-58 227.6 174 70.7
Prupe.5G131200 Prunus persica HOM05D001695 ORTHO05D002735 1.1e-57 227.3 174 73.6
Peaxi162Scf01257g00030 Petunia axillaris HOM05D001695 ORTHO05D002735 1.5e-57 226.9 174 69.5
Haze_09183 Corylus avellana HOM05D001695 ORTHO05D002735 2.0e-57 226.5 174 71.8
FvH4_5g10820 Fragaria vesca HOM05D001695 ORTHO05D002735 2.6e-57 226.1 174 69.5
FAN04G1351 Fragaria x ananassa HOM05D001695 ORTHO05D002735 3.3e-57 225.7 174 70.1
vmacro13844 Vaccinium macrocarpon HOM05D001695 ORTHO05D002735 4.4e-57 225.3 174 71.3
QL02p027749 Quercus lobata HOM05D001695 ORTHO05D002735 5.7e-57 224.9 175 70.9
Hund02284 Selenicereus undatus HOM05D001695 ORTHO05D002735 5.7e-57 224.9 176 69.9
FAN18G1376 Fragaria x ananassa HOM05D001695 ORTHO05D002735 7.4e-57 224.6 174 69.0
HanXRQChr03g0085241 Helianthus annuus HOM05D001695 ORTHO05D002735 1.3e-56 223.8 174 69.5
RcHm_v2.0_Chr7g0187341 Rosa chinensis HOM05D001695 ORTHO05D002735 1.3e-56 223.8 174 69.5
FAN08G2153 Fragaria x ananassa HOM05D001695 ORTHO05D002735 2.2e-56 223.0 174 69.5
CAN.G792.21 Capsicum annuum HOM05D001695 ORTHO05D002735 2.8e-56 222.6 174 67.8
CiPaw.12G076600 Carya illinoinensis HOM05D001695 ORTHO05D002735 3.7e-56 222.2 174 71.8
Ca_16296_v3 Cicer arietinum L. HOM05D001695 ORTHO05D002735 3.7e-56 222.2 177 68.9
MD14G1137300 Malus domestica HOM05D001695 ORTHO05D002735 3.7e-56 222.2 174 70.7
THA.LOC104817401 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 3.7e-56 222.2 134 80.6
TPR.G21319 Trifolium pratense HOM05D001695 ORTHO05D002735 8.2e-56 221.1 177 70.1
Ciclev10021724m.g Citrus clementina HOM05D001695 ORTHO05D002735 4.1e-55 218.8 176 71.0
Sc01g0010750 Simmondsia chinensis HOM05D001695 ORTHO05D002735 5.3e-55 218.4 134 80.6
AUR62019928 Chenopodium quinoa HOM05D001695 ORTHO05D002735 9.1e-55 217.6 174 67.8
Atru.chr9.1867 Acer truncatum HOM05D001695 ORTHO05D002735 1.2e-54 217.2 174 69.0
TWI60G1658 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 1.2e-54 217.2 136 80.1
Medtr3g080840 Medicago truncatula HOM05D001695 ORTHO05D002735 1.6e-54 216.9 177 68.4
Lsat_1_v5_gn_6_81741 Lactuca sativa HOM05D001695 ORTHO05D002735 2.0e-54 216.5 174 64.9
Thecc.03G219900 Theobroma cacao HOM05D001695 ORTHO05D002735 2.0e-54 216.5 146 77.4
Glyma.02G088200 Glycine max HOM05D001695 ORTHO05D002735 2.6e-54 216.1 153 75.8
Potri.001G083300 Populus trichocarpa HOM05D001695 ORTHO05D002735 2.6e-54 216.1 136 80.1
Solyc08g008630.4 Solanum lycopersicum HOM05D001695 ORTHO05D002735 2.6e-54 216.1 174 67.8
COL.COLO4_10808 Corchorus olitorius HOM05D001695 ORTHO05D002735 3.5e-54 215.7 174 67.8
Nn1g00413 Nelumbo nucifera HOM05D001695 ORTHO05D002735 3.5e-54 215.7 174 67.8
EL10Ac6g14898 Beta vulgaris HOM05D001695 ORTHO05D002735 4.5e-54 215.3 174 67.2
Eucgr.D01676 Eucalyptus grandis HOM05D001695 ORTHO05D002735 4.5e-54 215.3 137 78.8
Oeu010736.1 Olea europaea HOM05D001695 ORTHO05D002735 4.5e-54 215.3 177 70.1
TAR629G0227 Trochodendron aralioides HOM05D001695 ORTHO05D002735 5.9e-54 214.9 174 67.8
Aqoxy7G00010 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 1.3e-53 213.8 175 65.7
Duzib205G0936 Durio zibethinus HOM05D001695 ORTHO05D002735 1.3e-53 213.8 134 80.6
PGSC0003DMG402005859 Solanum tuberosum HOM05D001695 ORTHO05D002735 1.3e-53 213.8 134 78.4
Sopen08g004470 Solanum pennellii HOM05D001695 ORTHO05D002735 1.7e-53 213.4 134 77.6
Glyma.13G001100 Glycine max HOM05D001695 ORTHO05D002735 2.2e-53 213.0 176 67.6
Cpa.g.sc15.141 Carica papaya HOM05D001695 ORTHO05D002735 2.9e-53 212.6 134 79.9
Cfa011915 Carpinus fangiana HOM05D001695 ORTHO05D002735 8.5e-53 211.1 128 82.8
Lj6g0013848 Lotus japonicus HOM05D001695 ORTHO05D002735 8.5e-53 211.1 177 68.9
Aa31LG2G1720 Aethionema arabicum HOM05D001695 ORTHO05D002735 1.1e-52 210.7 136 78.7
Sabra01G0059900 Salix brachista HOM05D001695 ORTHO05D002735 1.1e-52 210.7 135 77.8
VMungo0540G1432 Vigna mungo HOM05D001695 ORTHO05D002735 1.5e-52 210.3 136 79.4
CANSAT21G0810 Cannabis sativa HOM05D001695 ORTHO05D002735 1.9e-52 209.9 174 66.1
Manes.02G002100 Manihot esculenta HOM05D001695 ORTHO05D002735 1.9e-52 209.9 134 78.4
Phvul.006G009940 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 1.9e-52 209.9 136 79.4
AUR62007063 Chenopodium quinoa HOM05D001695 ORTHO05D002735 3.2e-52 209.1 174 66.1
Sp2g00880 Schrenkiella parvula HOM05D001695 ORTHO05D002735 4.2e-52 208.8 136 76.5
EL10Ac5g12416 Beta vulgaris HOM05D001695 ORTHO05D002735 5.5e-52 208.4 191 61.8
CARHR046210 Cardamine hirsuta HOM05D001695 ORTHO05D002735 5.5e-52 208.4 133 78.9
Psat5g110120 Pisum sativum HOM05D001695 ORTHO05D002735 1.2e-51 207.2 177 67.8
Gorai.003G077200 Gossypium raimondii HOM05D001695 ORTHO05D002735 2.7e-51 206.1 134 79.1
Gohir.A02G098400 Gossypium hirsutum HOM05D001695 ORTHO05D002735 3.6e-51 205.7 134 79.1
Gohir.D03G085266 Gossypium hirsutum HOM05D001695 ORTHO05D002735 4.7e-51 205.3 134 79.1
BcaB07g31412 Brassica carinata HOM05D001695 ORTHO05D002735 6.1e-51 204.9 138 73.9
PSO135G0900 Papaver somniferum HOM05D001695 ORTHO05D002735 8.0e-51 204.5 178 64.0
AL2G10080 Arabidopsis lyrata HOM05D001695 ORTHO05D002735 1.8e-50 203.4 133 76.7
A09p15280 Brassica napus HOM05D001695 ORTHO05D002735 1.8e-50 203.4 135 74.8
MELO3C013771.2 Cucumis melo HOM05D001695 ORTHO05D002735 1.8e-50 203.4 176 64.8
Lalb_Chr24g0402771 Lupinus albus HOM05D001695 ORTHO05D002735 1.8e-50 203.4 150 72.0
AT1G64680 Arabidopsis thaliana HOM05D001695 ORTHO05D002735 2.3e-50 203.0 133 75.9
Carub.0002s0005 Capsella rubella HOM05D001695 ORTHO05D002735 2.3e-50 203.0 133 76.7
BraA09t37174Z Brassica rapa HOM05D001695 ORTHO05D002735 3.0e-50 202.6 135 74.1
BcaC04g22506 Brassica carinata HOM05D001695 ORTHO05D002735 4.0e-50 202.2 135 74.1
C09p18560 Brassica napus HOM05D001695 ORTHO05D002735 4.0e-50 202.2 135 74.1
BolC9t54752H Brassica oleracea HOM05D001695 ORTHO05D002735 4.0e-50 202.2 135 74.1
BraA09t37040Z Brassica rapa HOM05D001695 ORTHO05D002735 4.0e-50 202.2 135 75.6
BcaC04g22681 Brassica carinata HOM05D001695 ORTHO05D002735 5.2e-50 201.8 135 75.6
C09p16720 Brassica napus HOM05D001695 ORTHO05D002735 5.2e-50 201.8 135 75.6
BolC9t54572H Brassica oleracea HOM05D001695 ORTHO05D002735 5.2e-50 201.8 135 75.6
CsaV3_3G000840 Cucumis sativus L. HOM05D001695 ORTHO05D002735 5.2e-50 201.8 137 75.9
arahy.Tifrunner.gnm1.ann1.AGX1S0 Arachis hypogaea HOM05D001695 ORTHO05D002735 6.7e-50 201.4 177 65.5
BcaB07g31548 Brassica carinata HOM05D001695 ORTHO05D002735 6.7e-50 201.4 137 75.2
A09p13940 Brassica napus HOM05D001695 ORTHO05D002735 8.8e-50 201.1 135 74.8
ATR0579G157 Amborella trichopoda HOM05D001695 ORTHO05D002735 1.5e-49 200.3 149 71.1
MBI12_g48067_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 1.7e-48 196.8 155 69.0
Sed0011976 Sechium edule HOM05D001695 ORTHO05D002735 2.2e-48 196.4 135 73.3
Thhalv10023652m.g Eutrema salsugineum HOM05D001695 ORTHO05D002735 2.8e-48 196.1 133 73.7
Nitab4.5_0005544g0020 Nicotiana tabacum HOM05D001695 ORTHO05D002735 4.8e-48 195.3 135 74.1
CDE11G0902 Ceratophyllum demersum HOM05D001695 ORTHO05D002735 1.4e-47 193.7 134 72.4
Hma1.2p1_0456F.1_g156720 Hydrangea macrophylla HOM05D001695 ORTHO05D002735 3.1e-47 192.6 144 70.8
MBI12_g44350_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 1.2e-46 190.7 154 67.5
unitig_27.g25209 Utricularia gibba HOM05D001695 ORTHO05D002735 4.5e-46 188.7 135 68.1
ECA240G2548 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.7e-45 186.8 120 77.5
Os08g0114100 Oryza sativa ssp. japonica HOM05D001695 ORTHO05D002735 2.3e-42 176.4 144 63.9
Zm00001eb260820 Zea mays HOM05D001695 ORTHO05D002735 2.3e-42 176.4 138 67.4
SEGI_06911 Sequoiadendron giganteum HOM05D001695 ORTHO05D002735 9.8e-41 171.0 144 61.1
Pp3c26_11090 Physcomitrium patens HOM05D001695 ORTHO05D002735 2.0e-38 163.3 134 60.4
SMO145G0294 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 4.5e-38 162.2 135 61.5
SGA_v2.0_scaffold267G46183 Striga asiatica HOM05D001695 ORTHO05D002735 1.7e-37 160.2 135 63.7
SMO145G0173 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 4.2e-36 155.6 145 55.2
AagrBONN_evm.TU.Sc2ySwM_344.2007 Anthoceros agrestis HOM05D001695 ORTHO05D002735 1.6e-35 153.7 158 54.4
EL10Ac4g08987 Beta vulgaris HOM05D001695 ORTHO05D002735 2.3e-34 149.8 112 68.8
MD06G1120600 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-34 149.4 174 55.7
EL10Ac1g01649 Beta vulgaris HOM05D001695 ORTHO05D002735 2.6e-33 146.4 144 59.0
Mapoly0052s0029 Marchantia polymorpha HOM05D001695 ORTHO05D002735 2.6e-33 146.4 135 55.6
PGR031G0821 Punica granatum HOM05D001695 ORTHO05D002735 3.4e-33 146.0 142 60.6
Cc08_g16830 Coffea canephora HOM05D001695 ORTHO05D002735 4.4e-33 145.6 97 74.2
EL10Ac6g13092 Beta vulgaris HOM05D000255 ORTHO05D002735 1.1e-31 141.0 142 59.2
BcaB07g34121 Brassica carinata HOM05D001695 ORTHO05D002735 3.1e-31 139.4 85 81.2
EL10Ac2g04141 Beta vulgaris HOM05D001695 ORTHO05D002735 4.1e-31 139.0 103 68.9
ClCG10G000790 Citrullus lanatus HOM05D001695 ORTHO05D002735 2.7e-30 136.3 104 70.2
arahy.Tifrunner.gnm1.ann1.HKF9H0 Arachis hypogaea HOM05D001695 ORTHO05D002735 3.3e-28 129.4 146 57.5
CBR_g8844 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-27 126.7 132 51.5
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 1.1e-20 104.4 160 43.8
GSVIVG01019663001 Vitis vinifera HOM05D001695 ORTHO05D002735 2.5e-20 103.2 54 88.9
TWI15G1003 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 8.9e-18 94.7 82 68.3
Cre16.g661150 Chlamydomonas reinhardtii HOM05D001695 ORTHO05D002735 2.7e-14 83.2 157 35.0
Nn5g29481 Nelumbo nucifera HOM05D001695 ORTHO05D002735 2.5e-12 76.6 67 58.2
Pp3c9_19810 Physcomitrium patens HOM05D001695 ORTHO05D002735 7.3e-12 75.1 152 32.9
Zm00001eb381060 Zea mays HOM05D001695 ORTHO05D002735 2.8e-11 73.2 38 78.9
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 4.7e-11 72.4 107 43.9
AagrBONN_evm.TU.Sc2ySwM_228.2831 Anthoceros agrestis HOM05D001695 ORTHO05D002735 2.3e-10 70.1 145 33.1
Pp3c4_23850 Physcomitrium patens HOM05D001695 ORTHO05D002735 6.8e-10 68.6 134 34.3
MCO16G461 Micromonas commoda HOM05D001695 ORTHO05D002735 1.3e-08 64.3 118 34.7
PRCOL_00004153 Prasinoderma coloniale HOM05D001695 ORTHO05D002735 2.2e-08 63.5 112 33.9
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 6.4e-08 62.0 132 34.8
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 6.4e-08 62.0 154 33.1
Mapoly0123s0023 Marchantia polymorpha HOM05D001695 ORTHO05D002735 8.3e-08 61.6 169 29.0
SMO364G0442 Selaginella moellendorffii HOM05D001695 ORTHO05D002735 2.4e-07 60.1 71 42.3
Oeu038031.1 Olea europaea HOM05D001695 ORTHO05D008931 3.2e-07 59.7 167 26.3
MCO09G768 Micromonas commoda HOM05D001695 ORTHO05D002735 4.1e-07 59.3 77 36.4
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 7.1e-07 58.5 117 30.8
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 1.2e-06 57.8 130 33.8
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 1.6e-06 57.4 122 33.6
Carub.0001s0219 Capsella rubella HOM05D001695 ORTHO05D002735 2.1e-06 57.0 116 31.0
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 2.1e-06 57.0 114 31.6
Nn2g13290 Nelumbo nucifera HOM05D001695 ORTHO05D002735 2.1e-06 57.0 54 57.4
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 2.1e-06 57.0 114 32.5
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.7e-06 56.6 124 31.5
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 7.8e-06 55.1 116 31.9


User provided reference genes

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