Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 7.9e-64 246.9 121 100.0
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 3.7e-13 78.6 40 100.0
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 1.2e-11 73.6 46 80.4
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.6e-11 73.2 46 78.3
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 3.5e-11 72.0 45 77.8
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.7e-10 69.7 46 76.1
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.3e-10 69.3 45 75.6
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 2.3e-10 69.3 45 80.0
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 5.1e-10 68.2 46 73.9
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 5.1e-10 68.2 46 73.9
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.1e-09 67.0 45 75.6
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 1.1e-09 67.0 46 73.9
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 1.5e-09 66.6 46 73.9
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 1.9e-09 66.2 45 71.1
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 4.3e-09 65.1 56 60.7
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 7.3e-09 64.3 45 68.9
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 9.5e-09 63.9 97 48.5
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 9.5e-09 63.9 46 71.7
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.2e-08 63.5 50 62.0
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.2e-08 63.5 45 71.1
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 1.2e-08 63.5 46 67.4
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 2.1e-08 62.8 40 77.5
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 2.1e-08 62.8 44 75.0
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 2.1e-08 62.8 46 71.7
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 2.1e-08 62.8 43 69.8
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 2.8e-08 62.4 46 65.2
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 3.6e-08 62.0 48 70.8
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 4.7e-08 61.6 44 68.2
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 4.7e-08 61.6 45 64.4
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 4.7e-08 61.6 46 73.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 4.7e-08 61.6 47 63.8
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 6.2e-08 61.2 47 70.2
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 1.1e-07 60.5 45 66.7
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.1e-07 60.5 45 64.4
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.4e-07 60.1 45 66.7
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 2.3e-07 59.3 40 72.5
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 2.3e-07 59.3 46 63.0
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 3.1e-07 58.9 45 68.9
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 3.1e-07 58.9 41 68.3
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 4.0e-07 58.5 41 70.7
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 4.0e-07 58.5 47 68.1
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 4.0e-07 58.5 46 63.0
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 4.0e-07 58.5 40 70.0
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 5.2e-07 58.2 40 70.0
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 5.2e-07 58.2 45 64.4
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 5.2e-07 58.2 40 72.5
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 6.8e-07 57.8 41 68.3
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 6.8e-07 57.8 41 68.3
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 6.8e-07 57.8 57 57.9
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 8.9e-07 57.4 40 70.0
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 8.9e-07 57.4 44 61.4
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.2e-06 57.0 46 60.9
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.5e-06 56.6 39 69.2
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 2.0e-06 56.2 46 60.9
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 2.0e-06 56.2 45 62.2
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 3.4e-06 55.5 40 67.5
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.4e-06 55.1 45 62.2
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 5.8e-06 54.7 45 62.2
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 5.8e-06 54.7 40 65.0
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 7.6e-06 54.3 41 61.0
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 7.6e-06 54.3 46 60.9
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 7.6e-06 54.3 40 65.0


User provided reference genes

Program Settings