Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 1.0e-54 216.5 108 100.0
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 3.1e-27 125.2 102 62.7
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.2e-23 113.2 68 80.9
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 4.4e-21 104.8 80 62.5
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 2.2e-20 102.4 82 65.9
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 8.2e-20 100.5 84 70.2
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 1.4e-19 99.8 80 58.8
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.4e-19 99.0 78 64.1
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 3.1e-19 98.6 81 61.7
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 5.3e-19 97.8 80 66.2
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.2e-18 96.7 79 59.5
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.0e-17 93.6 82 54.9
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 1.0e-17 93.6 74 64.9
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.3e-17 93.2 80 58.8
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.7e-17 92.8 80 57.5
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.7e-17 92.8 80 56.2
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 2.9e-17 92.0 81 55.6
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 3.8e-17 91.7 80 61.2
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 5.5e-16 87.8 82 53.7
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 5.5e-16 87.8 103 55.3
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.6e-15 86.3 74 58.1
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.6e-15 86.3 69 60.9
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 1.6e-15 86.3 89 52.8
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 3.6e-15 85.1 82 57.3
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.0e-14 83.6 76 53.9
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.4e-14 83.2 78 53.8
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 3.0e-14 82.0 73 57.5
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 3.9e-14 81.6 73 57.5
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 5.2e-14 81.3 82 53.7
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 5.2e-14 81.3 76 52.6
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 5.2e-14 81.3 76 53.9
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 8.8e-14 80.5 83 51.8
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 8.8e-14 80.5 81 54.3
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 4.4e-13 78.2 82 51.2
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 4.4e-13 78.2 82 51.2
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 4.4e-13 78.2 82 51.2
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 4.4e-13 78.2 82 51.2
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 5.7e-13 77.8 78 52.6
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 7.4e-13 77.4 80 50.0
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 9.7e-13 77.0 78 55.1
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 9.7e-13 77.0 78 55.1
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 2.2e-12 75.9 82 50.0
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 2.2e-12 75.9 82 51.2
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 2.2e-12 75.9 78 55.1
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 2.8e-12 75.5 81 46.9
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 4.8e-12 74.7 80 53.8
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 6.3e-12 74.3 81 50.6
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.4e-11 73.2 78 48.7
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 1.4e-11 73.2 89 50.6
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 2.4e-11 72.4 79 46.8
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 4.1e-11 71.6 89 51.7
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 5.3e-11 71.2 77 51.9
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 9.1e-11 70.5 80 45.0
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 1.2e-10 70.1 80 51.2
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 2.6e-10 68.9 91 45.1
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 3.5e-10 68.6 76 44.7
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.0e-09 67.0 72 52.8
HanXRQChr16g0519261 Helianthus annuus HOM05D007785 ORTHO05D008997 1.0e-09 67.0 70 51.4
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 1.3e-09 66.6 73 47.9
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 1.7e-09 66.2 82 41.5
MELO3C006238.2 Cucumis melo HOM05D007785 ORTHO05D008997 2.2e-09 65.9 89 46.1
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 3.8e-09 65.1 73 49.3
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 3.8e-09 65.1 79 45.6
DCAR_029543 Daucus carota HOM05D007785 ORTHO05D008997 6.5e-09 64.3 80 47.5
HanXRQChr16g0520951 Helianthus annuus HOM05D007785 ORTHO05D008997 6.5e-09 64.3 76 47.4
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 1.1e-08 63.5 89 44.9
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.1e-08 63.5 80 43.8
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 2.5e-08 62.4 73 45.2
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 4.2e-08 61.6 73 47.9
unitig_5.g30995 Utricularia gibba HOM05D000121 ORTHO05D000102 1.2e-07 60.1 75 46.7
unitig_748.g7129 Utricularia gibba HOM05D000121 ORTHO05D000102 1.2e-07 60.1 75 46.7
arahy.Tifrunner.gnm1.ann1.TXA0XA Arachis hypogaea HOM05D007785 ORTHO05D008997 1.6e-07 59.7 73 43.8
arahy.Tifrunner.gnm1.ann1.XHE4AQ Arachis hypogaea HOM05D007785 ORTHO05D008997 1.6e-07 59.7 73 43.8
ATR0049G031 Amborella trichopoda HOM05D007785 ORTHO05D008997 2.1e-07 59.3 69 49.3
Medtr4g098710 Medicago truncatula HOM05D007785 ORTHO05D008997 2.1e-07 59.3 89 47.2
Prupe.2G110100 Prunus persica HOM05D007785 ORTHO05D008997 3.6e-07 58.5 66 51.5
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 4.7e-07 58.2 73 47.9
Gohir.D03G170000 Gossypium hirsutum HOM05D012518 ORTHO05D008997 6.1e-07 57.8 80 41.2
Gorai.003G180300 Gossypium raimondii HOM05D012518 ORTHO05D008997 6.1e-07 57.8 80 41.2
Ca_22059_v3 Cicer arietinum L. HOM05D007785 ORTHO05D008997 1.0e-06 57.0 82 46.3
Dinv43563 Davidia involucrata HOM05D007785 ORTHO05D008997 1.0e-06 57.0 78 44.9
THA.LOC104807966 Tarenaya hassleriana HOM05D010231 ORTHO05D012284 1.0e-06 57.0 76 43.4
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.4e-06 56.6 80 42.5
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 1.8e-06 56.2 72 45.8
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 1.8e-06 56.2 73 47.9
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.8e-06 56.2 77 41.6
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 2.3e-06 55.8 78 46.2
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 3.0e-06 55.5 71 43.7
Sed0016926 Sechium edule HOM05D007785 ORTHO05D008997 4.0e-06 55.1 88 43.2
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 5.2e-06 54.7 73 49.3
Psat4g078560 Pisum sativum HOM05D007785 ORTHO05D008997 5.2e-06 54.7 84 41.7
Sp1g28440 Schrenkiella parvula HOM05D010231 ORTHO05D012284 5.2e-06 54.7 81 38.3
Gohir.D09G192932 Gossypium hirsutum HOM05D012518 ORTHO05D008997 6.7e-06 54.3 85 37.6


User provided reference genes

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