Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006773 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 2.2e-174 615.5 315 100.0
CSS0004498 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 5.9e-143 511.1 313 86.9
Rhsim05G0233900 Rhododendron simsii HOM05D001078 ORTHO05D000927 3.1e-59 233.0 352 47.4
Actinidia11478 Actinidia chinensis HOM05D001078 ORTHO05D000927 6.9e-59 231.9 318 48.4
CSS0032667 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 1.1e-35 154.8 80 96.2
CSS0042555 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 4.5e-34 149.4 80 93.8
CSS0012271 Camellia sinensis var. sinensis HOM05D001078 ORTHO05D000927 1.6e-23 114.4 77 80.5
Haze_21209 Corylus avellana HOM05D001078 ORTHO05D000927 9.7e-21 105.1 323 33.4
Lj2C55G8 Lonicera japonica HOM05D001078 ORTHO05D000927 4.8e-20 102.8 297 32.0
COL.COLO4_06159 Corchorus olitorius HOM05D001078 ORTHO05D000927 1.8e-19 100.9 330 30.9
QL07p031378 Quercus lobata HOM05D001078 ORTHO05D000927 1.8e-19 100.9 309 32.7
Dinv16935 Davidia involucrata HOM05D001078 ORTHO05D000927 3.1e-19 100.1 217 42.4
Potri.016G141400 Populus trichocarpa HOM05D001078 ORTHO05D000927 4.1e-19 99.8 351 30.8
Sabra04G0157800 Salix brachista HOM05D001078 ORTHO05D000927 2.6e-18 97.1 355 30.7
Potri.006G112000 Populus trichocarpa HOM05D001078 ORTHO05D000927 4.5e-18 96.3 329 31.0
Duzib151G0405 Durio zibethinus HOM05D001078 ORTHO05D000927 1.0e-17 95.1 331 32.3
Sabra06G0087300 Salix brachista HOM05D001078 ORTHO05D000927 4.2e-16 89.7 345 31.9
Thecc.04G146600 Theobroma cacao HOM05D001078 ORTHO05D000927 5.5e-16 89.4 301 29.6
Nitab4.5_0004009g0020 Nicotiana tabacum HOM05D001078 ORTHO05D000927 9.4e-16 88.6 336 32.7
Cfa016996 Carpinus fangiana HOM05D001478 ORTHO05D002240 4.7e-15 86.3 295 33.6
Ciclev10013346m.g Citrus clementina HOM05D001078 ORTHO05D000927 4.4e-13 79.7 256 33.2
Manes.08G167600 Manihot esculenta HOM05D001078 ORTHO05D000927 4.4e-13 79.7 319 30.4
Nitab4.5_0000195g0020 Nicotiana tabacum HOM05D001078 ORTHO05D000927 4.4e-13 79.7 336 31.2
Peaxi162Scf00732g00114 Petunia axillaris HOM05D001078 ORTHO05D000927 1.4e-11 74.7 329 30.7
PGSC0003DMG400019814 Solanum tuberosum HOM05D001078 ORTHO05D000927 4.1e-11 73.2 333 29.4
Atru.chr8.58 Acer truncatum HOM05D001078 ORTHO05D000927 5.9e-10 69.3 100 47.0
Lj3g0000933 Lotus japonicus HOM05D001078 ORTHO05D000927 5.9e-10 69.3 326 29.8
GSVIVG01029855001 Vitis vinifera HOM05D001078 ORTHO05D000927 1.3e-09 68.2 311 30.5
CAN.G110.8 Capsicum annuum HOM05D001078 ORTHO05D000927 3.8e-09 66.6 325 30.5
Solyc09g055660.3 Solanum lycopersicum HOM05D001078 ORTHO05D000927 1.5e-08 64.7 325 27.1
Sopen09g018840 Solanum pennellii HOM05D001078 ORTHO05D000034 1.9e-08 64.3 331 27.5
Prupe.6G298300 Prunus persica HOM05D001078 ORTHO05D000927 7.2e-08 62.4 318 28.6
Sc20g0007290 Simmondsia chinensis HOM05D001078 ORTHO05D000927 7.2e-08 62.4 71 46.5
Sc20g0007580 Simmondsia chinensis HOM05D001078 ORTHO05D000927 7.2e-08 62.4 71 46.5
Gohir.D02G001400 Gossypium hirsutum HOM05D001078 ORTHO05D000927 9.4e-08 62.0 67 52.2
Gorai.005G001900 Gossypium raimondii HOM05D001078 ORTHO05D000927 9.4e-08 62.0 67 52.2
MD04G1178300 Malus domestica HOM05D001078 ORTHO05D000927 1.2e-07 61.6 292 27.1
Gohir.A02G001100 Gossypium hirsutum HOM05D001078 ORTHO05D000927 1.6e-07 61.2 67 50.7
Migut.J00009 Erythranthe guttata HOM05D001078 ORTHO05D189593 1.0e-06 58.5 292 27.7
Dinv12294 Davidia involucrata HOM05D001078 ORTHO05D000927 1.8e-06 57.8 84 42.9
FAN02G1981 Fragaria x ananassa HOM05D001078 ORTHO05D000927 6.8e-06 55.8 71 43.7
TAR633G1652 Trochodendron aralioides HOM05D001078 ORTHO05D000927 8.8e-06 55.5 113 35.4


User provided reference genes

Program Settings