Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006757 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 3.9e-157 558.1 296 100.0
CSS0005911 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 2.1e-118 429.5 244 93.0
CSS0010677 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 4.0e-117 425.2 244 92.2
Actinidia39011 Actinidia chinensis HOM05D000113 ORTHO05D005835 1.6e-86 323.6 263 68.8
vmacro01724 Vaccinium macrocarpon HOM05D000113 ORTHO05D005835 5.3e-85 318.5 253 68.4
Hma1.2p1_0427F.1_g150750 Hydrangea macrophylla HOM05D000113 ORTHO05D005835 8.4e-75 284.6 256 61.3
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 6.7e-72 275.0 266 59.0
GSVIVG01023271001 Vitis vinifera HOM05D000113 ORTHO05D005835 3.0e-64 249.6 257 56.4
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 4.3e-63 245.7 274 53.3
Oeu058638.1 Olea europaea HOM05D000113 ORTHO05D005835 2.8e-62 243.0 249 58.2
QL02p100213 Quercus lobata HOM05D000113 ORTHO05D005835 6.3e-62 241.9 258 55.0
Potri.004G222900 Populus trichocarpa HOM05D000113 ORTHO05D005835 1.8e-61 240.4 249 54.6
Sabra01G0168800 Salix brachista HOM05D000113 ORTHO05D005835 1.5e-60 237.3 250 52.4
TAR381G0519 Trochodendron aralioides HOM05D000113 ORTHO05D005835 5.0e-59 232.3 269 50.2
Thecc.02G023600 Theobroma cacao HOM05D000113 ORTHO05D005835 8.5e-59 231.5 256 52.3
DCAR_029273 Daucus carota HOM05D000113 ORTHO05D005835 2.5e-58 229.9 260 49.2
COL.COLO4_17738 Corchorus olitorius HOM05D000113 ORTHO05D005835 5.5e-58 228.8 256 52.0
Manes.10G119700 Manihot esculenta HOM05D000113 ORTHO05D005835 9.3e-58 228.0 263 52.1
CiPaw.06G173200 Carya illinoinensis HOM05D000113 ORTHO05D005835 2.1e-57 226.9 250 52.4
MD15G1433800 Malus domestica HOM05D000113 ORTHO05D005835 6.1e-57 225.3 271 50.9
MSTRG.16496 Avicennia marina HOM05D000113 ORTHO05D005835 7.9e-57 224.9 275 49.1
Cpa.g.sc30.39 Carica papaya HOM05D000113 ORTHO05D005835 1.3e-56 224.2 249 51.4
Migut.B00785 Erythranthe guttata HOM05D000113 ORTHO05D005835 1.8e-56 223.8 275 49.1
Lsat_1_v5_gn_9_120661 Lactuca sativa HOM05D000113 ORTHO05D005835 1.1e-55 221.1 266 47.0
SGA_v2.0_scaffold272G46375 Striga asiatica HOM05D000113 ORTHO05D005835 1.5e-55 220.7 256 50.8
Lalb_Chr13g0304501 Lupinus albus HOM05D000113 ORTHO05D005835 2.5e-55 219.9 282 47.9
FvH4_5g21580 Fragaria vesca HOM05D000113 ORTHO05D005835 4.3e-55 219.2 256 50.4
HanXRQChr03g0065101 Helianthus annuus HOM05D000113 ORTHO05D005835 4.3e-55 219.2 266 47.7
Solyc01g103690.4 Solanum lycopersicum HOM05D000113 ORTHO05D005835 9.7e-55 218.0 249 53.8
Ciclev10000030m.g Citrus clementina HOM05D000113 ORTHO05D005835 1.6e-54 217.2 256 50.8
TWI59G0289 Tripterygium wilfordii HOM05D000113 ORTHO05D005835 1.6e-54 217.2 263 49.8
Nitab4.5_0002596g0100 Nicotiana tabacum HOM05D000113 ORTHO05D005835 2.2e-54 216.9 249 52.6
Sopen01g046100 Solanum pennellii HOM05D000113 ORTHO05D005835 2.2e-54 216.9 249 53.8
FAN18G0136 Fragaria x ananassa HOM05D000113 ORTHO05D005835 2.8e-54 216.5 256 50.0
Prupe.1G577400 Prunus persica HOM05D000113 ORTHO05D005835 3.7e-54 216.1 253 51.8
CANSAT54G2975 Cannabis sativa HOM05D000113 ORTHO05D005835 4.8e-54 215.7 274 48.2
Nitab4.5_0000948g0060 Nicotiana tabacum HOM05D000113 ORTHO05D005835 1.4e-53 214.2 247 51.8
RcHm_v2.0_Chr7g0209021 Rosa chinensis HOM05D000113 ORTHO05D005835 1.4e-53 214.2 257 50.6
ECA240G0867 Erigeron canadensis HOM05D000113 ORTHO05D005835 1.8e-53 213.8 273 45.8
FAN04G1601 Fragaria x ananassa HOM05D000113 ORTHO05D005835 2.4e-53 213.4 256 49.6
SalBow8G4197 Salvia bowleyana HOM05D000113 ORTHO05D005835 3.1e-53 213.0 255 51.4
Gohir.D01G173900 Gossypium hirsutum HOM05D000113 ORTHO05D005835 5.3e-53 212.2 259 47.9
Gorai.002G216000 Gossypium raimondii HOM05D000113 ORTHO05D005835 9.1e-53 211.5 259 47.9
FAN08G0819 Fragaria x ananassa HOM05D000113 ORTHO05D005835 3.4e-52 209.5 257 48.6
Glyma.17G001100 Glycine max HOM05D000113 ORTHO05D005835 1.0e-51 208.0 272 47.4
Sed0015728 Sechium edule HOM05D000113 ORTHO05D005835 1.7e-51 207.2 255 50.6
Peaxi162Scf00011g00940 Petunia axillaris HOM05D000113 ORTHO05D005835 2.9e-51 206.5 261 49.4
Medtr4g134790 Medicago truncatula HOM05D000113 ORTHO05D005835 3.8e-51 206.1 272 47.1
CAN.G798.54 Capsicum annuum HOM05D000113 ORTHO05D005835 5.0e-51 205.7 247 51.4
TPR.G5965 Trifolium pratense HOM05D000113 ORTHO05D005835 8.5e-51 204.9 274 46.7
Phvul.003G075000 Phaseolus vulgaris HOM05D000113 ORTHO05D005835 1.4e-50 204.1 269 48.0
Gohir.A01G182800 Gossypium hirsutum HOM05D000113 ORTHO05D005835 1.9e-50 203.8 259 47.1
VMungo1215G2435 Vigna mungo HOM05D000113 ORTHO05D005835 3.2e-50 203.0 258 49.6
arahy.Tifrunner.gnm1.ann1.NM6SG7 Arachis hypogaea HOM05D000113 ORTHO05D005835 2.7e-49 199.9 255 46.7
arahy.Tifrunner.gnm1.ann1.F0MMCG Arachis hypogaea HOM05D000113 ORTHO05D005835 7.9e-49 198.4 255 47.1
Cc02_g23020 Coffea canephora HOM05D000113 ORTHO05D005835 1.8e-48 197.2 252 46.4
Psat4g000920 Pisum sativum HOM05D000113 ORTHO05D005835 2.3e-48 196.8 256 48.0
Sc07g0004580 Simmondsia chinensis HOM05D000113 ORTHO05D005835 2.3e-48 196.8 250 47.2
AL2G17950 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 3.0e-48 196.4 255 47.8
Ca_13538_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005835 3.9e-48 196.1 274 46.4
Nn5g27790 Nelumbo nucifera HOM05D000113 ORTHO05D005835 6.7e-48 195.3 260 47.3
MBI09_g02133_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005835 8.8e-48 194.9 277 44.4
Aa31LG2G11010 Aethionema arabicum HOM05D000113 ORTHO05D005835 2.0e-47 193.7 252 48.0
Lj2g0019885 Lotus japonicus HOM05D000113 ORTHO05D005835 3.3e-47 193.0 269 44.6
Eucgr.G00347 Eucalyptus grandis HOM05D000113 ORTHO05D005835 4.4e-47 192.6 252 49.2
C09p23220 Brassica napus HOM05D000113 ORTHO05D005835 1.3e-46 191.0 250 47.6
BolC9t55241H Brassica oleracea HOM05D000113 ORTHO05D005835 1.3e-46 191.0 250 47.6
Sp2g05520 Schrenkiella parvula HOM05D000113 ORTHO05D005835 4.8e-46 189.1 250 48.0
AT1G58060 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 6.3e-46 188.7 255 46.3
A09p18610 Brassica napus HOM05D000113 ORTHO05D005835 6.3e-46 188.7 250 48.0
BraA09t37485Z Brassica rapa HOM05D000113 ORTHO05D005835 6.3e-46 188.7 250 48.0
Hund12935 Selenicereus undatus HOM05D008000 ORTHO05D010275 6.3e-46 188.7 272 42.3
Carub.0002s0657 Capsella rubella HOM05D000113 ORTHO05D005835 1.1e-45 188.0 249 46.6
Ah.02g128270 Amaranthus hybridus HOM05D000113 ORTHO05D005835 5.3e-45 185.7 249 45.8
THA.LOC104820242 Tarenaya hassleriana HOM05D000113 ORTHO05D005835 5.3e-45 185.7 264 45.8
Actinidia10124 Actinidia chinensis HOM05D002653 ORTHO05D005835 6.9e-45 185.3 185 59.5
MELO3C019423.2 Cucumis melo HOM05D000113 ORTHO05D005835 1.2e-44 184.5 284 41.9
Thhalv10023215m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 2.0e-44 183.7 251 47.0
ClCG05G009410 Citrullus lanatus HOM05D000113 ORTHO05D005835 1.0e-43 181.4 279 44.4
CsaV3_3G019320 Cucumis sativus L. HOM05D000113 ORTHO05D005835 1.0e-43 181.4 278 41.7
Aqoxy6G00123 Aquilegia oxysepala HOM05D000113 ORTHO05D005835 1.1e-42 177.9 246 45.9
EL10Ac6g14137 Beta vulgaris HOM05D000113 ORTHO05D005835 4.7e-41 172.6 270 40.4
ATR0626G246 Amborella trichopoda HOM05D000113 ORTHO05D005835 7.9e-41 171.8 265 41.9
PGR042G0228 Punica granatum HOM05D000113 ORTHO05D005835 6.7e-40 168.7 271 42.1
AUR62040619 Chenopodium quinoa HOM05D000113 ORTHO05D005835 6.3e-38 162.2 272 40.4
AT1G58050 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 7.0e-37 158.7 257 41.2
Carub.0002s0658 Capsella rubella HOM05D000113 ORTHO05D005835 7.0e-37 158.7 270 39.6
Atru.chr6.769 Acer truncatum HOM05D000113 ORTHO05D005835 2.2e-35 153.7 92 78.3
Sp2g05550 Schrenkiella parvula HOM05D000113 ORTHO05D005835 2.9e-35 153.3 250 40.4
Thhalv10023216m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 6.5e-35 152.1 245 40.8
A03p66400 Brassica napus HOM05D000113 ORTHO05D005835 1.5e-34 151.0 245 39.6
BraA03t15696Z Brassica rapa HOM05D000113 ORTHO05D005835 1.5e-34 151.0 245 39.6
HPP92_005700 Vanilla planifolia HOM05D000113 ORTHO05D005835 6.1e-33 145.6 269 38.3
BcaB07g31161 Brassica carinata HOM05D000113 ORTHO05D005835 1.8e-32 144.1 256 40.2
HPP92_005690 Vanilla planifolia HOM05D000113 ORTHO05D005835 5.2e-32 142.5 269 37.5
CDE04G1155 Ceratophyllum demersum HOM05D000113 ORTHO05D005835 2.8e-30 136.7 246 38.2
Haze_10062 Corylus avellana HOM05D000113 ORTHO05D005835 5.3e-29 132.5 198 45.5
SEGI_10903 Sequoiadendron giganteum HOM05D000113 ORTHO05D005835 5.2e-24 115.9 284 33.5
Zm00001eb082690 Zea mays HOM05D000113 ORTHO05D005835 2.8e-22 110.2 148 39.9
Duzib052G0463 Durio zibethinus HOM05D000113 ORTHO05D005835 5.4e-21 105.9 75 65.3
AL2G17920 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 1.7e-19 100.9 257 31.9
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 8.6e-19 98.6 87 57.5
Pp3c26_14400 Physcomitrium patens HOM05D000113 ORTHO05D005835 3.0e-16 90.1 319 29.5
SMO164G0084 Selaginella moellendorffii HOM05D000113 ORTHO05D005835 5.2e-16 89.4 320 25.9
unitig_26.g9027 Utricularia gibba HOM05D000113 ORTHO05D005835 7.5e-15 85.5 180 37.8
Actinidia20136 Actinidia chinensis HOM05D000113 ORTHO05D005835 8.6e-11 72.0 69 60.9
CBR_g34283 Chara braunii HOM05D000113 ORTHO05D005835 2.8e-09 67.0 314 26.1
Mapoly0048s0072 Marchantia polymorpha HOM05D000113 ORTHO05D005835 4.7e-09 66.2 173 30.6
Atru.chr6.768 Acer truncatum HOM05D000113 ORTHO05D005835 4.4e-07 59.7 73 52.1
AagrBONN_evm.TU.Sc2ySwM_344.5572 Anthoceros agrestis HOM05D000113 ORTHO05D005835 9.8e-07 58.5 86 38.4


User provided reference genes

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