Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 4.6e-152 541.2 276 100.0
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.8e-133 478.8 242 100.0
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 5.2e-111 404.8 280 76.1
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 9.8e-110 400.6 275 76.4
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 1.2e-107 393.7 274 75.9
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.2e-102 377.1 268 73.1
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 2.9e-101 372.5 264 73.9
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 1.1e-97 360.5 235 77.9
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.9e-97 359.8 267 70.0
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 5.6e-97 358.2 275 70.9
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 4.7e-96 355.1 274 68.2
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 1.4e-95 353.6 274 67.9
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 6.8e-95 351.3 268 67.9
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 8.9e-95 350.9 274 67.2
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.2e-94 350.5 274 67.5
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 1.5e-94 350.1 274 67.9
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 5.8e-94 348.2 235 74.5
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.7e-93 346.7 270 68.9
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 9.2e-92 340.9 265 69.8
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.0e-91 338.2 277 66.8
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 7.8e-91 337.8 276 66.3
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 5.1e-90 335.1 267 64.8
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.5e-89 333.6 277 66.4
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 7.3e-89 331.3 267 65.5
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 1.6e-88 330.1 274 64.2
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.4e-87 327.0 270 64.8
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 2.4e-87 326.2 263 65.4
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.5e-86 323.6 215 78.1
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 7.6e-86 321.2 277 63.2
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 1.7e-85 320.1 270 63.3
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 1.4e-84 317.0 224 74.6
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.2e-83 313.9 245 66.9
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 1.7e-82 310.1 278 61.9
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 3.0e-82 309.3 279 60.2
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 1.1e-81 307.4 273 60.8
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.5e-81 307.0 273 61.2
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 1.9e-81 306.6 258 63.2
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 1.9e-81 306.6 278 60.8
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 2.5e-81 306.2 261 63.2
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.8e-79 300.1 261 61.7
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 5.2e-79 298.5 261 61.3
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 6.9e-79 298.1 260 62.3
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 9.0e-79 297.7 261 60.9
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.4e-78 295.8 270 60.4
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 5.8e-78 295.0 276 57.2
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 7.6e-78 294.7 275 60.0
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.3e-77 293.9 281 56.9
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 2.9e-77 292.7 270 56.7
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.8e-77 292.4 261 60.5
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.2e-76 288.9 263 58.6
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 5.4e-76 288.5 280 57.9
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 7.1e-76 288.1 272 58.1
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 7.1e-76 288.1 272 58.5
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 9.3e-76 287.7 263 60.1
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.2e-75 287.3 281 59.8
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 7.8e-75 284.6 263 58.9
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.7e-74 283.5 263 58.2
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 5.1e-74 282.0 265 60.8
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 6.6e-74 281.6 269 58.7
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 9.6e-73 277.7 267 58.4
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.3e-72 277.3 262 58.8
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 1.3e-72 277.3 262 59.5
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 8.1e-72 274.6 290 54.1
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 5.3e-71 271.9 240 62.5
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 9.0e-71 271.2 260 58.5
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 3.4e-70 269.2 271 54.6
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 4.5e-70 268.9 221 65.6
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 9.9e-70 267.7 222 60.8
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.3e-69 267.3 227 62.1
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.7e-69 266.9 257 57.6
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 2.9e-69 266.2 246 60.6
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 3.8e-69 265.8 211 67.3
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.4e-68 263.8 245 62.0
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 2.4e-68 263.1 217 64.1
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 4.6e-67 258.8 255 59.6
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.0e-66 257.7 258 57.4
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 1.3e-66 257.3 263 54.4
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 2.3e-66 256.5 230 63.0
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 3.9e-66 255.8 257 56.0
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 3.9e-66 255.8 257 56.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 3.9e-66 255.8 257 56.8
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 1.6e-64 250.4 248 57.3
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 3.1e-63 246.1 259 53.7
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 4.9e-61 238.8 299 49.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 8.4e-61 238.0 276 50.7
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.4e-60 236.5 210 62.4
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 6.0e-59 231.9 364 41.2
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.8e-58 230.3 247 55.1
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 1.6e-56 223.8 274 49.3
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 2.6e-54 216.5 269 47.6
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.4e-52 210.7 253 51.0
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.5e-51 206.1 273 46.5
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 6.0e-51 205.3 276 48.2
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 6.0e-51 205.3 276 48.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 3.9e-50 202.6 270 48.1
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 3.9e-50 202.6 274 46.7
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 3.9e-50 202.6 267 47.2
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 8.7e-50 201.4 264 48.9
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 8.7e-50 201.4 264 48.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 7.4e-49 198.4 232 50.0
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 6.3e-48 195.3 275 46.5
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 8.2e-48 194.9 275 45.5
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 8.2e-48 194.9 270 46.7
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.4e-47 194.1 271 46.1
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.8e-47 193.7 283 43.8
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 9.0e-47 191.4 283 43.5
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.5e-46 190.7 217 51.2
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 2.5e-44 183.3 251 46.2
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 4.6e-43 179.1 122 73.8
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 3.9e-42 176.0 164 56.7
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 7.4e-41 171.8 163 58.3
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 1.3e-40 171.0 232 46.6
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 4.5e-38 162.5 101 81.2
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 3.9e-34 149.4 178 47.8
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 2.2e-32 143.7 165 49.7
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 4.8e-32 142.5 105 66.7
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 4.8e-32 142.5 179 43.6
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 3.8e-29 132.9 189 42.3
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 6.5e-29 132.1 124 58.1
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.4e-28 131.0 153 51.0
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 7.4e-25 118.6 84 71.4
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 1.7e-24 117.5 70 82.9
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 1.4e-23 114.4 214 39.3
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.6e-22 110.9 228 37.3
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 4.5e-22 109.4 72 76.4
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 5.0e-21 105.9 213 36.6
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.5e-17 94.4 55 83.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.2e-16 90.5 63 69.8
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 9.1e-15 85.1 48 91.7
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-14 82.0 112 42.0
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 3.6e-11 73.2 150 37.3
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 4.0e-10 69.7 66 53.0


User provided reference genes

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