Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 8.4e-198 694.1 541 100.0
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.6e-177 626.7 541 94.3
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.3e-65 255.0 526 59.7
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 5.7e-53 213.0 556 59.5
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 9.7e-53 212.2 538 59.7
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 1.2e-50 205.3 448 68.1
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.7e-49 201.4 165 57.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 7.4e-45 186.0 522 56.5
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 8.2e-44 182.6 539 56.4
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.6e-42 177.6 450 65.1
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 3.5e-42 177.2 507 58.6
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 4.5e-42 176.8 456 60.3
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 7.7e-42 176.0 537 55.9
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.0e-41 175.6 529 48.0
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 1.7e-41 174.9 530 58.5
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 3.8e-41 173.7 151 55.6
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 1.9e-40 171.4 443 63.2
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 3.2e-40 170.6 541 56.6
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 2.7e-39 167.5 436 61.5
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.0e-38 165.6 503 58.4
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.4e-38 165.2 437 62.2
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 2.3e-38 164.5 168 46.4
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 8.8e-38 162.5 539 51.8
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.0e-37 161.4 171 49.7
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 4.4e-37 160.2 168 48.2
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 7.5e-37 159.5 447 62.2
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 7.5e-37 159.5 531 56.9
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.7e-36 158.3 470 56.8
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 5.3e-35 153.3 446 63.0
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 9.1e-35 152.5 432 63.2
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 2.2e-33 147.9 136 52.2
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 1.9e-32 144.8 443 60.7
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.7e-31 141.0 432 62.0
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.0e-30 139.0 140 51.4
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.4e-30 138.7 438 61.2
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 6.8e-30 136.3 476 57.4
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 6.8e-30 136.3 474 56.8
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 8.8e-30 136.0 439 58.5
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.4e-29 134.0 140 50.0
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.3e-28 132.1 454 48.5
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.7e-28 131.7 464 57.1
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 2.2e-28 131.3 432 59.7
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 4.8e-28 130.2 464 57.1
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 7.0e-27 126.3 159 42.8
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.6e-26 125.2 187 42.2
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 2.0e-26 124.8 490 55.9
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 2.9e-25 120.9 151 41.1
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 8.6e-25 119.4 443 51.0
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 7.2e-24 116.3 139 43.2
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 1.6e-23 115.2 439 58.8
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 3.6e-23 114.0 162 36.4
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 4.7e-23 113.6 366 65.6
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 4.7e-23 113.6 450 57.3
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.0e-22 112.5 447 48.8
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 3.0e-22 110.9 166 40.4
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 6.8e-22 109.8 170 35.9
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 2.0e-21 108.2 151 42.4
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 4.4e-21 107.1 510 54.9
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 2.2e-20 104.8 164 35.4
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 2.2e-20 104.8 164 39.0
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 4.9e-20 103.6 448 49.8
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 1.1e-19 102.4 375 57.1
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 1.8e-19 101.7 161 33.5
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 2.4e-19 101.3 379 64.6
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 7.0e-19 99.8 484 52.7
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 7.0e-19 99.8 403 60.8
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 9.2e-19 99.4 364 67.6
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 3.3e-16 90.9 357 66.7
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 1.2e-15 89.0 403 59.8
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 1.6e-15 88.6 190 37.4
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.3e-14 84.7 89 46.1
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 2.3e-14 84.7 91 42.9
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 9.8e-13 79.3 192 31.8
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 4.9e-12 77.0 75 46.7
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 4.1e-11 73.9 122 33.6
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 1.6e-10 72.0 195 29.7
Cpa.g.sc7.128 Carica papaya HOM05D007145 ORTHO05D008952 2.7e-10 71.2 144 31.9
Os03g0336000 Oryza sativa ssp. japonica HOM05D007752 ORTHO05D009994 6.0e-10 70.1 90 32.2
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 1.3e-09 68.9 67 49.3
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.5e-08 64.7 54 53.7
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 5.6e-08 63.5 130 29.2
HPP92_021332 Vanilla planifolia HOM05D007212 ORTHO05D000003 1.2e-07 62.4 159 28.3
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 2.8e-07 61.2 130 29.2
CAN.G479.71 Capsicum annuum HOM05D007173 ORTHO05D009151 4.7e-07 60.5 159 26.4
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 4.7e-07 60.5 87 35.6
PGSC0003DMG400008024 Solanum tuberosum HOM05D007145 ORTHO05D008952 6.2e-07 60.1 144 28.5
TWI31G0517 Tripterygium wilfordii HOM05D006858 ORTHO05D008767 8.0e-07 59.7 146 27.4
ECA233G6190 Erigeron canadensis HOM05D007145 ORTHO05D008952 1.1e-06 59.3 144 27.8
CDE02G3157 Ceratophyllum demersum HOM05D007145 ORTHO05D008952 1.4e-06 58.9 159 23.9
Manes.14G077600 Manihot esculenta HOM05D002453 ORTHO05D002107 1.4e-06 58.9 138 26.8
MELO3C009102.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.8e-06 58.5 60 48.3
Sopen04g032760 Solanum pennellii HOM05D007145 ORTHO05D008952 2.3e-06 58.2 144 28.5
BcaC06g36186 Brassica carinata HOM05D005287 ORTHO05D006893 3.1e-06 57.8 128 28.1
A07p04270 Brassica napus HOM05D005287 ORTHO05D006893 3.1e-06 57.8 128 30.5
C07p06750 Brassica napus HOM05D005287 ORTHO05D006893 3.1e-06 57.8 128 28.1
BolC7t41098H Brassica oleracea HOM05D005287 ORTHO05D006893 3.1e-06 57.8 128 28.1
BraA07t28218Z Brassica rapa HOM05D005287 ORTHO05D006893 3.1e-06 57.8 128 30.5
Ca_23675_v3 Cicer arietinum L. HOM05D007145 ORTHO05D008952 3.1e-06 57.8 164 24.4
Peaxi162Scf00126g00029 Petunia axillaris HOM05D007145 ORTHO05D008952 3.1e-06 57.8 144 28.5
Solyc04g079150.1 Solanum lycopersicum HOM05D007145 ORTHO05D008952 3.1e-06 57.8 144 28.5
Lsat_1_v5_gn_6_5460 Lactuca sativa HOM05D007145 ORTHO05D008952 4.0e-06 57.4 125 29.6
Os02g0759500 Oryza sativa ssp. japonica HOM05D007145 ORTHO05D008952 4.0e-06 57.4 144 27.8
ATR0807G010 Amborella trichopoda HOM05D006556 ORTHO05D008146 5.2e-06 57.0 162 24.7
BcaC06g36288 Brassica carinata HOM05D006556 ORTHO05D008146 5.2e-06 57.0 143 28.0
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 8.9e-06 56.2 159 26.4
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 8.9e-06 56.2 152 27.0
Sopen09g024780 Solanum pennellii HOM05D006556 ORTHO05D008146 8.9e-06 56.2 123 27.6


User provided reference genes

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