Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.8e-61 239.2 128 100.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 2.1e-54 215.7 122 95.1
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.3e-53 212.2 122 92.6
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-52 209.9 122 91.8
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.6e-51 206.1 122 90.2
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.8e-50 202.6 121 87.6
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.2e-49 199.9 122 86.1
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 5.8e-49 197.6 122 83.6
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 5.8e-49 197.6 122 83.6
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.0e-48 196.8 122 83.6
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 1.3e-48 196.4 122 83.6
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 1.7e-48 196.1 123 84.6
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.7e-48 196.1 122 82.8
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.7e-48 196.1 122 83.6
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 2.2e-48 195.7 122 83.6
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 8.4e-48 193.7 120 85.0
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 1.1e-47 193.4 122 84.4
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.4e-47 193.0 122 82.0
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.9e-47 192.6 122 82.8
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 2.5e-47 192.2 120 83.3
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 2.5e-47 192.2 122 80.3
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 2.5e-47 192.2 122 82.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 2.5e-47 192.2 121 83.5
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 3.2e-47 191.8 123 81.3
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.2e-47 191.8 120 84.2
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 4.2e-47 191.4 122 82.0
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 5.5e-47 191.0 122 82.0
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 9.3e-47 190.3 122 80.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.2e-46 189.9 122 80.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.1e-46 189.1 122 79.5
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.1e-46 189.1 122 80.3
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 2.1e-46 189.1 122 82.8
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 2.1e-46 189.1 122 81.1
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 2.7e-46 188.7 122 78.7
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.5e-46 188.3 122 82.0
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 4.6e-46 188.0 120 79.2
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 6.1e-46 187.6 120 80.0
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 7.9e-46 187.2 120 80.8
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 7.9e-46 187.2 122 80.3
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 7.9e-46 187.2 122 78.7
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 7.9e-46 187.2 120 80.8
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.0e-45 186.8 122 78.7
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.8e-45 186.0 122 78.7
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.8e-45 186.0 122 78.7
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 3.0e-45 185.3 122 78.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 3.0e-45 185.3 120 79.2
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 3.0e-45 185.3 122 76.2
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.9e-45 184.9 122 77.9
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 3.9e-45 184.9 123 77.2
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 5.1e-45 184.5 122 76.2
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 5.1e-45 184.5 122 77.0
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 5.1e-45 184.5 120 78.3
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 5.1e-45 184.5 122 78.7
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 6.7e-45 184.1 125 76.8
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 6.7e-45 184.1 122 78.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 8.7e-45 183.7 120 78.3
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 8.7e-45 183.7 120 78.3
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.1e-44 183.3 122 77.9
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.5e-44 183.0 122 77.0
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 2.5e-44 182.2 120 78.3
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.5e-44 182.2 122 77.0
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.3e-44 181.8 120 78.3
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 4.3e-44 181.4 122 79.5
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 5.7e-44 181.0 122 77.0
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 7.4e-44 180.6 123 77.2
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 7.4e-44 180.6 122 77.0
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 7.4e-44 180.6 122 76.2
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 9.7e-44 180.3 124 75.0
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 9.7e-44 180.3 122 77.9
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 9.7e-44 180.3 122 77.0
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 1.6e-43 179.5 122 76.2
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.6e-43 179.5 121 76.9
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.6e-43 179.5 121 76.9
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 76.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 2.2e-43 179.1 120 76.7
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 2.2e-43 179.1 121 75.2
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.2e-43 179.1 117 79.5
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.8e-43 178.7 120 78.3
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 8.2e-43 177.2 115 79.1
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.1e-42 176.8 122 74.6
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 2.4e-42 175.6 122 72.1
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.1e-42 175.3 120 76.7
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 4.1e-42 174.9 122 73.8
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 4.1e-42 174.9 122 73.8
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 5.3e-42 174.5 109 81.7
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 6.9e-42 174.1 122 72.1
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 6.9e-42 174.1 122 73.8
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.5e-41 172.9 122 71.3
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 2.0e-41 172.6 142 69.7
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 5.9e-41 171.0 122 72.1
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 5.9e-41 171.0 123 74.0
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.0e-40 170.2 174 57.5
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 1.0e-40 170.2 122 73.8
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 2.9e-40 168.7 123 74.0
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 3.8e-40 168.3 122 70.5
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.5e-40 167.5 125 72.8
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.9e-39 166.0 122 70.5
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 3.2e-39 165.2 116 73.3
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 3.2e-39 165.2 116 73.3
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 5.5e-39 164.5 117 71.8
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 7.2e-39 164.1 121 71.9
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 7.2e-39 164.1 121 71.9
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 9.4e-39 163.7 115 73.0
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.6e-38 162.9 148 63.5
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.8e-37 159.5 94 91.5
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 2.3e-37 159.1 122 69.7
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 3.0e-37 158.7 122 71.3
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 5.1e-37 157.9 131 65.6
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 5.1e-37 157.9 91 93.4
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 7.4e-36 154.1 107 71.0
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 8.2e-35 150.6 91 84.6
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.0e-32 143.7 119 59.7
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 8.5e-32 140.6 96 76.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 3.0e-29 132.1 103 65.0
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 3.9e-29 131.7 97 68.0
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 3.3e-28 128.6 101 63.4
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 2.6e-25 119.0 69 88.4
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 1.3e-24 116.7 127 56.7
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.7e-22 109.0 68 77.9
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 4.1e-18 95.1 115 47.8
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.0e-16 90.5 46 95.7
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 9.4e-15 84.0 58 75.9
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 3.0e-13 79.0 56 75.0
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 5.4e-10 68.2 52 69.2
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 2.2e-08 62.8 51 64.7
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.8e-08 62.0 37 78.4


User provided reference genes

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