Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006683 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D022126 2.2e-65 252.3 141 100.0
Dinv19709 Davidia involucrata HOM05D000147 ORTHO05D001254 2.1e-36 156.0 151 68.9
Dinv33035 Davidia involucrata HOM05D000147 ORTHO05D001254 6.9e-35 151.0 151 66.9
Actinidia24832 Actinidia chinensis HOM05D000147 ORTHO05D001254 1.4e-32 143.3 150 67.3
CSS0010073 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D001254 2.6e-26 122.5 146 63.7
vmacro14996 Vaccinium macrocarpon HOM05D000147 ORTHO05D001254 2.7e-23 112.5 149 56.4
Cc01_g20700 Coffea canephora HOM05D000147 ORTHO05D001254 3.0e-22 109.0 145 53.1
Rhsim01G0284000 Rhododendron simsii HOM05D000147 ORTHO05D001254 6.7e-22 107.8 152 56.6
Lsat_1_v5_gn_9_921 Lactuca sativa HOM05D000147 ORTHO05D001254 1.1e-21 107.1 153 56.9
CAN.G1209.29 Capsicum annuum HOM05D000147 ORTHO05D001254 2.0e-21 106.3 143 53.8
Solyc06g084530.3 Solanum lycopersicum HOM05D000147 ORTHO05D001254 2.2e-20 102.8 145 53.1
Sopen06g035910 Solanum pennellii HOM05D000147 ORTHO05D001254 2.2e-20 102.8 145 53.1
Nn3g21450 Nelumbo nucifera HOM05D000147 ORTHO05D001254 4.8e-20 101.7 152 52.0
Lj2C1191G5 Lonicera japonica HOM05D000147 ORTHO05D001254 1.1e-19 100.5 139 54.7
GSVIVG01027983001 Vitis vinifera HOM05D000147 ORTHO05D001254 3.4e-18 95.5 153 49.7
HanXRQChr15g0465741 Helianthus annuus HOM05D000147 ORTHO05D001254 1.0e-17 94.0 150 53.3
DCAR_012389 Daucus carota HOM05D000147 ORTHO05D001254 2.9e-17 92.4 141 53.9
TAR633G1845 Trochodendron aralioides HOM05D000147 ORTHO05D001254 5.0e-17 91.7 152 48.0
Nn4g25832 Nelumbo nucifera HOM05D000147 ORTHO05D001254 8.5e-17 90.9 151 48.3
ClCG09G005990 Citrullus lanatus HOM05D000147 ORTHO05D001254 3.2e-16 89.0 156 51.3
Gohir.A11G115000 Gossypium hirsutum HOM05D000147 ORTHO05D001254 9.4e-16 87.4 151 45.0
Nitab4.5_0015806g0010 Nicotiana tabacum HOM05D000147 ORTHO05D022126 1.6e-15 86.7 148 52.7
MELO3C016015.2 Cucumis melo HOM05D000147 ORTHO05D001254 3.6e-15 85.5 156 50.6
Gorai.007G128700 Gossypium raimondii HOM05D000147 ORTHO05D001254 3.6e-15 85.5 151 46.4
Nitab4.5_0002469g0030 Nicotiana tabacum HOM05D000147 ORTHO05D001254 3.6e-15 85.5 147 51.0
Nitab4.5_0024335g0010 Nicotiana tabacum HOM05D000147 ORTHO05D022126 3.6e-15 85.5 149 51.7
CsaV3_7G029130 Cucumis sativus L. HOM05D000147 ORTHO05D001254 4.7e-15 85.1 156 50.0
Nitab4.5_0000619g0180 Nicotiana tabacum HOM05D000147 ORTHO05D001254 1.0e-14 84.0 147 50.3
Peaxi162Scf00140g01128 Petunia axillaris HOM05D000147 ORTHO05D001254 2.3e-14 82.8 144 48.6
TAR362G0636 Trochodendron aralioides HOM05D000147 ORTHO05D001254 3.0e-14 82.4 158 49.4
Gohir.D11G120000 Gossypium hirsutum HOM05D000147 ORTHO05D001254 1.5e-13 80.1 151 44.4
CANSAT25G0997 Cannabis sativa HOM05D000147 ORTHO05D001254 2.0e-13 79.7 154 45.5
ECA247G1106 Erigeron canadensis HOM05D000147 ORTHO05D001254 2.2e-12 76.3 155 45.8
Lalb_Chr06g0163411 Lupinus albus HOM05D000147 ORTHO05D001254 2.8e-12 75.9 150 44.7
Sed0027983 Sechium edule HOM05D000147 ORTHO05D001254 2.8e-12 75.9 155 48.4
Sopen09g029770 Solanum pennellii HOM05D000147 ORTHO05D001254 3.7e-12 75.5 152 48.0
QL12p027230 Quercus lobata HOM05D000147 ORTHO05D001254 4.8e-12 75.1 154 44.8
COL.COLO4_23369 Corchorus olitorius HOM05D000147 ORTHO05D001254 1.1e-11 73.9 153 42.5
SGA_v2.0_scaffold36G14347 Striga asiatica HOM05D000147 ORTHO05D001254 1.1e-11 73.9 139 48.9
CAN.G339.25 Capsicum annuum HOM05D000147 ORTHO05D001254 1.8e-11 73.2 150 45.3
Lj1C27G9 Lonicera japonica HOM05D000147 ORTHO05D001254 2.4e-11 72.8 102 49.0
Lsat_1_v5_gn_8_53420 Lactuca sativa HOM05D000147 ORTHO05D001254 3.1e-11 72.4 103 50.5
Lalb_Chr02g0143221 Lupinus albus HOM05D000147 ORTHO05D001254 5.3e-11 71.6 149 45.0
Prupe.8G259000 Prunus persica HOM05D000147 ORTHO05D001254 7.0e-11 71.2 151 44.4
Gohir.D12G135433 Gossypium hirsutum HOM05D000147 ORTHO05D001254 1.2e-10 70.5 145 42.8
Gorai.008G146500 Gossypium raimondii HOM05D000147 ORTHO05D001254 1.2e-10 70.5 145 42.8
MD03G1285800 Malus domestica HOM05D000147 ORTHO05D001254 1.2e-10 70.5 154 44.8
AUR62008660 Chenopodium quinoa HOM05D000147 ORTHO05D001254 1.6e-10 70.1 151 42.4
Sed0001662 Sechium edule HOM05D000147 ORTHO05D001254 3.5e-10 68.9 153 49.0
Gohir.A12G131700 Gossypium hirsutum HOM05D000147 ORTHO05D001254 4.5e-10 68.6 144 43.8
Solyc09g074950.3 Solanum lycopersicum HOM05D000147 ORTHO05D001254 4.5e-10 68.6 151 45.7
Duzib133G1165 Durio zibethinus HOM05D000147 ORTHO05D001254 7.7e-10 67.8 149 40.3
Migut.N01500 Erythranthe guttata HOM05D000147 ORTHO05D001254 1.3e-09 67.0 138 43.5
Duzib138G0484 Durio zibethinus HOM05D000147 ORTHO05D001254 2.2e-09 66.2 151 43.0
MD11G1305200 Malus domestica HOM05D000147 ORTHO05D001254 2.2e-09 66.2 154 42.9
SGA_v2.0_scaffold2G01403 Striga asiatica HOM05D000147 ORTHO05D001254 2.2e-09 66.2 138 44.2
Cpa.g.sc9.217 Carica papaya HOM05D000147 ORTHO05D001254 1.9e-08 63.2 152 44.7
Duzib211G0232 Durio zibethinus HOM05D000147 ORTHO05D001254 1.9e-08 63.2 153 41.2
HanXRQChr12g0365921 Helianthus annuus HOM05D000147 ORTHO05D022126 1.9e-08 63.2 109 43.1
TWI14G0377 Tripterygium wilfordii HOM05D000147 ORTHO05D001254 4.2e-08 62.0 152 43.4
DCAR_005802 Daucus carota HOM05D000147 ORTHO05D001254 5.5e-08 61.6 140 40.7
Haze_04906 Corylus avellana HOM05D000147 ORTHO05D001254 9.4e-08 60.8 100 44.0
TPR.G34000 Trifolium pratense HOM05D000147 ORTHO05D001254 9.4e-08 60.8 148 41.2
Hund18134 Selenicereus undatus HOM05D000147 ORTHO05D001254 1.6e-07 60.1 137 40.9
MSTRG.17411 Avicennia marina HOM05D000147 ORTHO05D001254 2.7e-07 59.3 137 42.3
Cfa005940 Carpinus fangiana HOM05D000147 ORTHO05D001254 4.7e-07 58.5 122 44.3
Glyma.10G019400 Glycine max HOM05D000147 ORTHO05D001254 6.1e-07 58.2 142 45.8
EL10Ac7g17476 Beta vulgaris HOM05D000147 ORTHO05D001254 1.0e-06 57.4 146 39.0
Glyma.02G155100 Glycine max HOM05D000147 ORTHO05D001254 1.4e-06 57.0 109 45.0
Psat6g165720 Pisum sativum HOM05D000147 ORTHO05D001254 1.8e-06 56.6 147 39.5


User provided reference genes

Program Settings