Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006681 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-29 129.8 61 100.0
CSS0041445 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-28 126.3 61 96.7
CSS0044183 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-18 94.0 58 72.4
CSS0038237 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-18 93.2 57 70.2
CSS0033484 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-15 85.5 58 60.3
CSS0000797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-15 85.1 57 61.4
CSS0011645 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-15 85.1 60 60.0
CSS0017318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-15 85.1 58 60.3
CSS0010420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-15 84.7 58 58.6
FvH4_6g20391 Fragaria vesca HOM05D000002 ORTHO05D000001 1.1e-13 79.3 57 56.1
CSS0036457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-13 77.8 58 55.2
CSS0009999 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-13 77.4 60 53.3
FvH4_2g13961 Fragaria vesca HOM05D000002 ORTHO05D000001 9.4e-13 76.3 57 52.6
CSS0041750 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-12 75.5 60 58.3
CSS0046660 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-12 74.3 58 56.9
CSS0009806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0019697 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0023537 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0031148 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0034014 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0036314 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0040458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
CSS0043973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-12 73.2 60 55.0
TAR161G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.0e-11 72.8 60 51.7
CSS0046993 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-11 72.0 60 55.0
CSS0009573 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-11 71.6 60 53.3
CSS0021563 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-11 70.9 60 50.0
CSS0049295 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-11 70.5 60 56.7
Atru.chr4.1123 Acer truncatum HOM05D000002 ORTHO05D000001 8.8e-11 69.7 57 47.4
THA.LOC104809809 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.0e-10 68.6 55 50.9
ECA233G2864 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-10 67.8 58 51.7
CSS0011550 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 5.7e-10 67.0 54 57.4
CSS0017294 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 5.7e-10 67.0 54 57.4
ECA236G0149 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-10 67.0 60 51.7
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 5.7e-10 67.0 60 50.0
CSS0022795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 54 55.6
ECA232G0336 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA232G1865 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA246G2397 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA247G1552 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA247G1739 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA248G1829 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-10 66.6 60 50.0
ECA240G2787 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 65.9 60 51.7
ECA248G2762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 65.9 45 60.0
ECA233G0938 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-09 65.5 60 48.3
ECA233G5063 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-09 65.5 60 50.0
ECA234G0699 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-09 65.5 60 46.7
Atru.chr8.988 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-09 65.1 46 54.3
ECA233G1049 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 65.1 60 50.0
ECA236G1088 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 65.1 60 48.3
ECA240G0711 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 65.1 60 48.3
ECA247G3121 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 65.1 60 50.0
PGR083G1470 Punica granatum HOM05D000002 ORTHO05D000001 2.2e-09 65.1 57 38.6
ECA236G2152 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-09 64.7 45 57.8
ECA236G3365 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-09 64.7 45 57.8
ECA246G1723 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-09 64.7 45 57.8
ECA233G0916 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-09 64.3 60 48.3
CSS0017084 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.8e-09 63.9 61 52.5
CSS0022242 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.3e-09 63.5 53 50.9
CANSAT80G1640 Cannabis sativa HOM05D000002 ORTHO05D000001 6.3e-09 63.5 56 51.8
ECA232G2917 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-09 63.2 60 43.3
ECA234G2425 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-09 63.2 46 50.0
ECA238G3038 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-09 63.2 58 50.0
PGR142G0809 Punica granatum HOM05D000002 ORTHO05D000001 1.1e-08 62.8 57 40.4
ECA240G2430 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-08 60.1 60 45.0
Oeu019217.1 Olea europaea HOM05D000002 ORTHO05D000001 6.9e-08 60.1 50 50.0
THA.LOC104817078 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.9e-08 60.1 58 41.4
CSS0007612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 59.3 48 60.4
ECA233G3168 Erigeron canadensis HOM05D005358 ORTHO05D006384 1.2e-07 59.3 60 46.7
CsaV3_7G000610 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.5e-07 58.9 49 55.1
CsaV3_1G034000 Cucumis sativus L. HOM05D000002 ORTHO05D000001 2.6e-07 58.2 60 43.3
ClCG04G001530 Citrullus lanatus HOM05D000002 ORTHO05D000001 3.4e-07 57.8 58 44.8
CSS0008669 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D020241 7.7e-07 56.6 33 75.8
CAN.G398.25 Capsicum annuum HOM05D000002 ORTHO05D000001 7.7e-07 56.6 46 47.8
FvH4_6g05093 Fragaria vesca HOM05D000002 ORTHO05D000001 2.2e-06 55.1 39 59.0
RcHm_v2.0_Chr2g0151961 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-06 54.7 43 48.8
RcHm_v2.0_Chr2g0171331 Rosa chinensis HOM05D000002 ORTHO05D000001 2.9e-06 54.7 43 48.8
CSS0013899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-06 54.3 38 60.5
ECA238G3132 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-06 54.3 44 50.0
Sopen01g024990 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 53.9 59 47.5
CAN.G504.26 Capsicum annuum HOM05D000217 ORTHO05D000121 8.5e-06 53.1 46 45.7
CAN.G537.8 Capsicum annuum HOM05D001008 ORTHO05D009098 8.5e-06 53.1 45 46.7
Sopen11g018750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.5e-06 53.1 56 42.9


User provided reference genes

Program Settings