Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.6e-70 268.1 131 100.0
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 2.8e-38 162.2 94 81.9
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 4.9e-27 124.8 77 76.6
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 3.2e-26 122.1 103 55.3
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 2.3e-24 115.9 91 59.3
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 6.7e-24 114.4 91 62.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.1e-23 113.6 99 55.6
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 4.3e-23 111.7 116 46.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 5.6e-23 111.3 113 46.9
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 7.4e-23 110.9 77 66.2
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 8.1e-22 107.5 116 45.7
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.8e-21 106.3 91 58.2
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.8e-21 106.3 113 43.4
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 2.4e-21 105.9 92 55.4
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 4.0e-21 105.1 94 55.3
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 6.9e-21 104.4 104 51.9
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 6.9e-21 104.4 91 54.9
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 9.0e-21 104.0 90 55.6
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 4.5e-20 101.7 90 55.6
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 5.8e-20 101.3 94 54.3
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 1.0e-19 100.5 91 56.0
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.7e-19 99.8 104 50.0
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.7e-19 99.8 104 50.0
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.7e-19 99.8 93 53.8
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 2.2e-19 99.4 91 58.2
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 3.8e-19 98.6 96 52.1
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.8e-19 98.6 92 56.5
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 4.9e-19 98.2 96 52.1
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 4.9e-19 98.2 90 53.3
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 8.4e-19 97.4 91 57.1
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 8.4e-19 97.4 92 55.4
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.1e-18 97.1 92 55.4
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.1e-18 97.1 93 49.5
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.1e-18 97.1 90 56.7
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 1.4e-18 96.7 93 53.8
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 2.5e-18 95.9 91 52.7
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 2.5e-18 95.9 91 50.5
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 4.2e-18 95.1 108 48.1
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 7.1e-18 94.4 98 50.0
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 9.3e-18 94.0 99 48.5
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 9.3e-18 94.0 95 46.3
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 1.6e-17 93.2 88 52.3
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.6e-17 93.2 90 53.3
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 2.1e-17 92.8 91 52.7
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 2.1e-17 92.8 87 50.6
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 1.3e-16 90.1 92 47.8
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 6.7e-16 87.8 96 44.8
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 6.7e-16 87.8 90 48.9
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 8.7e-16 87.4 92 50.0
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 2.5e-15 85.9 93 46.2
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 2.5e-15 85.9 90 48.9
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.3e-15 85.1 91 49.5
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 5.7e-15 84.7 94 44.7
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 5.7e-15 84.7 91 50.5
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 7.4e-15 84.3 91 46.2
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 9.6e-15 84.0 94 44.7
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 1.6e-14 83.2 91 47.3
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 2.1e-14 82.8 91 48.4
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.8e-14 82.4 88 46.6
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 2.8e-14 82.4 99 44.4
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 6.3e-14 81.3 94 43.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.4e-13 80.1 94 42.6
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 1.8e-13 79.7 94 42.6
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 1.8e-13 79.7 91 46.2
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.8e-13 79.7 82 50.0
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 4.1e-13 78.6 91 46.2
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 5.3e-13 78.2 94 41.5
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 2.0e-12 76.3 91 44.0
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.3e-11 73.6 95 42.1
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 7.2e-10 67.8 91 40.7
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.3e-08 63.5 90 38.9
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 1.8e-08 63.2 60 55.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.9e-07 59.7 94 41.5
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 4.3e-07 58.5 101 38.6


User provided reference genes

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