Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006647 Camellia sinensis var. sinensis HOM05D001793 ORTHO05D113014 1.3e-27 125.6 60 100.0
FAN10G3205 Fragaria x ananassa HOM05D001793 ORTHO05D001938 2.1e-09 65.1 36 77.8
Ca_19911_v3 Cicer arietinum L. HOM05D001793 ORTHO05D001938 6.2e-09 63.5 36 80.6
FAN13G2543 Fragaria x ananassa HOM05D001793 ORTHO05D001938 4.0e-08 60.8 36 72.2
vmacro00224 Vaccinium macrocarpon HOM05D001793 ORTHO05D001938 1.5e-07 58.9 42 71.4
Dinv39073 Davidia involucrata HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 69.0
FvH4_7g11810 Fragaria vesca HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
FAN01G1187 Fragaria x ananassa HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
FAN03G2966 Fragaria x ananassa HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
FAN06G1984 Fragaria x ananassa HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
FAN06G4896 Fragaria x ananassa HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
FAN10G3582 Fragaria x ananassa HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 64.3
Sp1g10960 Schrenkiella parvula HOM05D001793 ORTHO05D001938 7.6e-07 56.6 42 66.7
Lalb_Chr07g0189831 Lupinus albus HOM05D001793 ORTHO05D001938 9.9e-07 56.2 42 66.7
Sc23g0003560 Simmondsia chinensis HOM05D001793 ORTHO05D001938 9.9e-07 56.2 42 66.7
Actinidia02086 Actinidia chinensis HOM05D001793 ORTHO05D001938 1.3e-06 55.8 42 69.0
Dinv37759 Davidia involucrata HOM05D001793 ORTHO05D001938 1.3e-06 55.8 42 66.7
Migut.E01047 Erythranthe guttata HOM05D001793 ORTHO05D001938 1.3e-06 55.8 42 66.7
Migut.E01133 Erythranthe guttata HOM05D001793 ORTHO05D001938 1.3e-06 55.8 42 66.7
THA.LOC104801480 Tarenaya hassleriana HOM05D001793 ORTHO05D001938 1.3e-06 55.8 42 64.3
Aqoxy3G04266 Aquilegia oxysepala HOM05D001793 ORTHO05D001938 1.7e-06 55.5 55 54.5
Eucgr.E01424 Eucalyptus grandis HOM05D001793 ORTHO05D001938 1.7e-06 55.5 42 66.7
Gohir.A12G221300 Gossypium hirsutum HOM05D001793 ORTHO05D001938 1.7e-06 55.5 42 69.0
Gohir.D12G223700 Gossypium hirsutum HOM05D001793 ORTHO05D001938 1.7e-06 55.5 42 69.0
Gorai.008G239900 Gossypium raimondii HOM05D001793 ORTHO05D001938 1.7e-06 55.5 42 69.0
MD07G1121500 Malus domestica HOM05D001793 ORTHO05D001938 1.7e-06 55.5 45 60.0
Prupe.2G144900 Prunus persica HOM05D001793 ORTHO05D001938 1.7e-06 55.5 45 60.0
GSVIVG01027604001 Vitis vinifera HOM05D001793 ORTHO05D001938 1.7e-06 55.5 42 64.3
Atru.chr5.305 Acer truncatum HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
CiPaw.01G262300 Carya illinoinensis HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 64.3
Ciclev10023931m.g Citrus clementina HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 64.3
Duzib133G0723 Durio zibethinus HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
Glyma.01G142600 Glycine max HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
Glyma.03G024100 Glycine max HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
Phvul.010G084300 Phaseolus vulgaris HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
Psat7g233520 Pisum sativum HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
TPR.G9859 Trifolium pratense HOM05D001793 ORTHO05D001938 2.2e-06 55.1 42 66.7
VMungo0331G1928 Vigna mungo HOM05D001793 ORTHO05D006161 2.2e-06 55.1 42 66.7
Actinidia14467 Actinidia chinensis HOM05D001793 ORTHO05D001938 2.9e-06 54.7 42 69.0
Thhalv10007001m.g Eutrema salsugineum HOM05D001793 ORTHO05D001938 2.9e-06 54.7 42 66.7
Medtr4g023610 Medicago truncatula HOM05D001793 ORTHO05D001938 2.9e-06 54.7 42 64.3
TWI60G1373 Tripterygium wilfordii HOM05D001793 ORTHO05D001938 2.9e-06 54.7 42 64.3
Ciclev10027965m.g Citrus clementina HOM05D001793 ORTHO05D001938 3.7e-06 54.3 42 64.3
Duzib205G0857 Durio zibethinus HOM05D001793 ORTHO05D001938 3.7e-06 54.3 42 66.7
Thecc.01G376700 Theobroma cacao HOM05D001793 ORTHO05D001938 3.7e-06 54.3 42 64.3
CsaV3_6G006180 Cucumis sativus L. HOM05D001793 ORTHO05D001938 4.9e-06 53.9 42 66.7
Lj3g0024654 Lotus japonicus HOM05D001793 ORTHO05D001938 4.9e-06 53.9 42 64.3
Rhsim11G0001300 Rhododendron simsii HOM05D016938 ORTHO05D006584 4.9e-06 53.9 28 89.3
RcHm_v2.0_Chr1g0350491 Rosa chinensis HOM05D001793 ORTHO05D001938 4.9e-06 53.9 33 72.7
SGA_v2.0_scaffold196G40943 Striga asiatica HOM05D001793 ORTHO05D001938 4.9e-06 53.9 42 64.3
Aa31LG1G2280 Aethionema arabicum HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 61.9
AT1G12360 Arabidopsis thaliana HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
EL10Ac1g00887 Beta vulgaris HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BcaB08g34281 Brassica carinata HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BcaB08g34282 Brassica carinata HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BcaC07g41704 Brassica carinata HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
A06p09240 Brassica napus HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
A09p63890 Brassica napus HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
C08p47430 Brassica napus HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BolC8t52283H Brassica oleracea HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BraA06t24111Z Brassica rapa HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
BraA09t41737Z Brassica rapa HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
CANSAT56G3408 Cannabis sativa HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 61.9
Carub.0001s1202 Capsella rubella HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
CARHR012650 Cardamine hirsuta HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
AUR62004212 Chenopodium quinoa HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
AUR62013636 Chenopodium quinoa HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
PGR031G3789 Punica granatum HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 61.9
Sed0012324 Sechium edule HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
TAR375G0352 Trochodendron aralioides HOM05D001793 ORTHO05D001938 6.4e-06 53.5 42 64.3
MSTRG.13787 Avicennia marina HOM05D001793 ORTHO05D001938 8.4e-06 53.1 42 64.3
Cpa.g.sc18.110 Carica papaya HOM05D001793 ORTHO05D001938 8.4e-06 53.1 43 58.1
Ciclev10004496m.g Citrus clementina HOM05D001793 ORTHO05D001938 8.4e-06 53.1 42 61.9
Manes.05G045400 Manihot esculenta HOM05D001793 ORTHO05D001938 8.4e-06 53.1 42 66.7


User provided reference genes

Program Settings