Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006642 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 5.7e-46 187.2 92 100.0
CSS0016412 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 2.2e-21 105.5 87 65.5
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 6.8e-07 57.4 29 89.7
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 1.2e-06 56.6 29 86.2
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 1.5e-06 56.2 29 86.2
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.5e-06 56.2 29 82.8
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.5e-06 56.2 29 86.2
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.5e-06 56.2 29 82.8
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.5e-06 56.2 29 82.8
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.0e-06 55.8 29 82.8
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 2.0e-06 55.8 29 82.8
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 2.0e-06 55.8 29 82.8
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 2.0e-06 55.8 29 82.8
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 2.0e-06 55.8 29 82.8
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 2.6e-06 55.5 29 82.8
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 2.6e-06 55.5 29 82.8
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 82.8
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 3.4e-06 55.1 29 79.3
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 4.4e-06 54.7 26 92.3
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 4.4e-06 54.7 29 79.3
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 4.4e-06 54.7 26 92.3
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 5.7e-06 54.3 29 82.8
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 5.7e-06 54.3 29 79.3
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 5.7e-06 54.3 26 88.5
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.7e-06 54.3 26 88.5
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 5.7e-06 54.3 29 79.3
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 75.9
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 7.5e-06 53.9 29 79.3
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 9.8e-06 53.5 29 75.9
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 9.8e-06 53.5 29 79.3


User provided reference genes

Program Settings