Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.0e-126 455.3 250 100.0
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.3e-121 439.1 250 98.0
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 4.3e-104 381.7 249 78.3
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 7.3e-104 380.9 251 80.9
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 5.8e-101 371.3 254 76.0
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.9e-100 369.0 224 82.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 2.4e-99 365.9 249 77.1
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 7.8e-98 360.9 252 73.4
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 9.5e-96 354.0 252 72.6
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 6.2e-95 351.3 250 73.6
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 1.4e-94 350.1 246 73.6
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 4.0e-94 348.6 250 72.0
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 6.8e-94 347.8 245 73.1
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.9e-94 347.4 249 73.5
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 4.4e-93 345.1 251 70.9
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.7e-92 343.2 213 81.2
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.7e-92 343.2 249 71.1
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.1e-91 340.5 249 69.9
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.4e-91 340.1 249 69.9
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.4e-91 340.1 249 69.9
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 3.2e-91 339.0 249 70.7
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.6e-90 336.7 272 65.8
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 7.8e-90 334.3 217 74.2
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.7e-89 333.2 254 76.4
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.3e-89 332.8 251 70.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 3.9e-89 332.0 253 68.8
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 6.6e-89 331.3 255 69.0
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 1.1e-88 330.5 250 68.4
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.1e-88 330.5 250 68.4
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 1.5e-88 330.1 253 69.2
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 4.3e-88 328.6 217 73.3
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 4.3e-88 328.6 251 68.9
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.2e-87 327.0 249 68.3
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 1.6e-87 326.6 251 70.9
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-86 323.9 263 65.4
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 1.4e-86 323.6 249 66.7
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.0e-86 322.0 250 66.8
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 5.2e-86 321.6 215 74.0
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 5.2e-86 321.6 250 66.8
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.9e-86 321.2 250 66.0
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 8.9e-86 320.9 249 69.9
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.2e-85 320.5 214 77.1
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.5e-85 320.1 210 78.1
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 2.0e-85 319.7 212 76.4
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 4.4e-85 318.5 212 75.9
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.7e-84 316.6 251 66.9
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.2e-84 316.2 215 72.6
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 2.2e-84 316.2 259 64.1
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 2.2e-84 316.2 252 68.7
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.9e-84 315.8 248 69.4
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 3.8e-84 315.5 250 65.6
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 3.8e-84 315.5 212 76.4
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 4.9e-84 315.1 250 65.6
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 4.9e-84 315.1 243 70.0
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.1e-83 313.9 212 76.4
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 1.9e-83 313.2 259 63.3
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.4e-83 312.8 250 65.6
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 2.4e-83 312.8 210 74.3
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 3.2e-83 312.4 212 74.1
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 4.2e-83 312.0 248 64.9
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 5.4e-83 311.6 248 68.5
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 5.4e-83 311.6 252 66.7
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 5.4e-83 311.6 251 65.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.6e-82 310.1 289 60.2
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 4.6e-82 308.5 250 64.4
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 2.3e-81 306.2 216 70.8
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.1e-80 303.9 216 72.2
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.9e-80 303.1 212 71.2
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.5e-80 302.8 250 64.8
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 2.5e-80 302.8 179 81.0
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 3.3e-80 302.4 249 65.5
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 4.3e-80 302.0 224 68.3
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 4.3e-80 302.0 211 70.6
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 5.6e-80 301.6 249 63.1
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 5.6e-80 301.6 251 63.3
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 5.6e-80 301.6 178 82.6
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 7.3e-80 301.2 211 73.0
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.3e-79 300.4 212 71.2
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 8.1e-79 297.7 259 64.5
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.1e-78 297.4 218 67.9
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.5e-77 293.5 222 66.2
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 9.9e-77 290.8 219 67.1
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 3.8e-76 288.9 162 84.0
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-75 287.3 260 60.8
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-75 287.3 219 67.6
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.2e-75 285.8 262 56.9
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 9.3e-75 284.3 262 59.9
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 9.3e-75 284.3 262 59.9
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 5.1e-73 278.5 181 75.1
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 6.7e-73 278.1 254 56.3
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 8.7e-73 277.7 254 56.3
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 8.7e-73 277.7 186 68.8
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.3e-71 273.9 206 68.0
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 3.6e-71 272.3 220 62.3
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.1e-70 270.8 220 61.8
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.6e-69 266.2 217 62.7
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 4.5e-69 265.4 276 56.5
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.1e-67 260.8 191 69.1
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.5e-66 255.8 145 85.5
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 4.6e-66 255.4 185 64.3
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 4.3e-64 248.8 145 84.1
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 5.6e-64 248.4 239 58.6
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 8.4e-60 234.6 175 68.0
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 3.4e-53 212.6 134 77.6
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.2e-51 206.1 237 52.3
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 7.2e-51 204.9 175 64.0
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.0e-49 199.5 164 61.6
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 4.3e-48 195.7 186 52.2
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 8.5e-44 181.4 161 61.5
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.1e-43 181.0 173 49.7
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 7.9e-42 174.9 200 46.0
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.3e-41 173.3 157 63.7
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 3.0e-41 172.9 182 46.7
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 4.4e-40 169.1 95 85.3
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 6.5e-36 155.2 166 55.4
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.3e-33 146.7 134 59.7
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.7e-28 130.6 96 66.7
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 5.2e-25 119.0 68 82.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 3.7e-15 86.3 177 29.9
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 5.4e-14 82.4 132 32.6
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 2.8e-10 70.1 139 33.1
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 3.0e-09 66.6 139 28.8
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 1.4e-06 57.8 62 45.2
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 4.1e-06 56.2 35 74.3


User provided reference genes

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