Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 1.7e-219 765.8 412 100.0
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 3.3e-170 602.1 426 79.8
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 2.8e-161 572.4 428 72.9
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 6.9e-160 567.8 365 77.3
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 2.6e-159 565.8 410 71.0
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.5e-157 559.3 368 75.0
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 7.2e-157 557.8 410 70.2
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 7.2e-157 557.8 410 70.2
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.6e-156 555.4 410 69.5
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 7.9e-156 554.3 365 75.6
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 2.3e-155 552.7 415 69.4
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 3.0e-155 552.4 367 74.4
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 3.0e-155 552.4 367 73.3
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 8.8e-155 550.8 368 75.0
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.1e-154 550.4 414 68.8
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 1.1e-154 550.4 365 76.2
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 7.4e-154 547.7 359 76.0
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 9.7e-154 547.4 411 69.1
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 3.7e-153 545.4 410 69.5
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 4.8e-153 545.0 368 75.3
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 4.8e-153 545.0 414 69.1
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 6.3e-153 544.7 407 68.3
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 8.2e-153 544.3 370 74.6
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 1.4e-152 543.5 422 67.8
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 3.1e-152 542.3 370 73.8
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 5.3e-152 541.6 424 68.4
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.5e-151 540.0 369 72.9
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 2.6e-151 539.3 363 74.7
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 4.5e-151 538.5 369 72.9
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 1.7e-150 536.6 369 72.9
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.2e-150 536.2 369 71.5
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 3.8e-150 535.4 365 72.9
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 5.0e-150 535.0 367 74.4
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 1.9e-149 533.1 413 70.5
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.2e-149 531.9 371 73.3
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 9.4e-149 530.8 369 71.8
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 2.1e-148 529.6 366 71.9
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 2.7e-148 529.3 349 77.4
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 3.6e-148 528.9 372 72.3
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 7.9e-148 527.7 366 71.0
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.9e-148 527.7 368 73.4
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.0e-147 527.3 368 71.7
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.4e-147 526.9 367 72.2
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 1.1e-146 523.9 373 71.6
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.5e-146 523.5 368 70.7
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 4.4e-146 521.9 361 72.3
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.3e-145 520.4 374 68.4
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.3e-145 520.4 367 71.7
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 2.2e-145 519.6 374 71.4
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 3.7e-145 518.8 362 73.5
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 8.2e-145 517.7 364 71.4
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 1.1e-144 517.3 367 70.3
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.1e-144 517.3 413 71.2
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.1e-144 517.3 413 71.2
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.8e-144 516.5 361 70.1
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 3.1e-144 515.8 364 70.9
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 4.1e-144 515.4 360 71.1
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 4.1e-144 515.4 360 71.1
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 4.1e-144 515.4 367 69.5
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 5.3e-144 515.0 360 71.1
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 9.1e-144 514.2 360 70.8
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 9.1e-144 514.2 368 70.1
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.2e-143 513.8 367 69.8
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.2e-143 513.8 366 71.9
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.2e-143 513.8 367 70.8
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.5e-143 513.5 369 70.5
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.0e-142 510.8 366 70.5
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.7e-142 510.0 376 69.1
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 3.8e-142 508.8 436 61.0
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 5.0e-142 508.4 360 70.0
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 6.5e-142 508.1 431 64.7
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 8.5e-142 507.7 361 74.2
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 8.5e-142 507.7 371 68.7
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.1e-141 507.3 366 70.2
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 1.9e-141 506.5 368 68.2
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 3.2e-141 505.8 366 70.2
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.2e-140 503.8 361 71.5
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.2e-140 503.8 361 70.4
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.2e-140 503.8 361 69.0
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 3.6e-140 502.3 360 70.8
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 6.1e-140 501.5 370 68.9
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 3.0e-139 499.2 373 68.6
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 4.0e-139 498.8 385 66.2
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.3e-138 495.7 353 70.8
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 3.3e-138 495.7 369 68.6
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.4e-138 495.4 360 68.1
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.1e-136 490.7 378 68.0
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.8e-136 490.0 368 68.8
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.1e-136 488.8 376 65.7
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 5.3e-136 488.4 378 68.5
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 7.0e-136 488.0 363 69.4
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 5.0e-134 481.9 424 64.6
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 8.5e-134 481.1 361 67.6
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 1.2e-130 470.7 368 67.1
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 1.4e-128 463.8 366 64.5
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 6.1e-124 448.4 376 61.4
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 5.2e-123 445.3 361 64.0
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 1.5e-122 443.7 363 63.1
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.7e-119 433.0 369 61.8
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 3.2e-112 409.5 376 59.0
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 3.0e-110 402.9 371 58.8
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.5e-106 390.6 367 56.4
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.1e-104 384.4 364 55.8
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 4.1e-104 382.5 370 55.1
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 1.9e-101 373.6 361 55.4
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 4.3e-101 372.5 382 51.3
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.4e-99 367.5 361 57.9
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.2e-95 354.4 366 50.8
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.5e-93 347.4 379 49.9
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 4.3e-93 345.9 298 66.4
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 4.3e-93 345.9 316 60.1
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.0e-90 337.0 223 70.9
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 4.6e-87 325.9 265 63.0
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.1e-83 314.7 180 81.1
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.1e-83 314.7 180 81.1
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.4e-80 304.3 367 47.1
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 8.1e-76 288.5 307 52.4
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 1.5e-66 257.7 386 39.1
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.4e-64 251.1 170 72.9
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 1.5e-53 214.5 372 39.0
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 9.6e-53 211.8 117 84.6
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.3e-49 201.4 431 36.7
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.5e-34 149.8 105 72.4
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 5.0e-33 146.4 81 82.7
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 4.2e-32 143.3 129 62.8
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 2.1e-31 141.0 389 32.4
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 7.4e-29 132.5 131 54.2
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 9.1e-27 125.6 356 29.5
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.4e-11 75.1 73 52.1
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.4e-11 75.1 73 52.1
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 2.0e-10 71.2 69 52.2
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 1.8e-06 58.2 298 24.8


User provided reference genes

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