Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.1e-201 704.9 356 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-189 665.2 356 95.5
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-187 659.1 356 94.7
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.4e-178 627.5 342 94.2
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-171 605.1 356 89.6
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 3.0e-167 592.0 356 82.6
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 3.0e-167 592.0 356 82.6
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-165 585.9 356 86.2
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.0e-143 513.8 352 73.3
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 2.5e-142 509.2 351 74.6
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 4.8e-141 505.0 351 72.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.8e-140 503.1 359 68.2
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.2e-139 500.4 359 71.3
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.4e-139 498.8 366 70.2
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 3.8e-138 495.4 350 71.1
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.7e-136 489.2 348 70.4
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 6.0e-136 488.0 358 69.6
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.0e-135 487.3 359 71.6
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.0e-135 487.3 364 68.7
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 3.3e-134 482.3 346 68.2
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.3e-134 482.3 356 69.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.3e-134 481.9 361 69.3
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.6e-133 479.9 362 68.0
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 8.1e-133 477.6 355 70.1
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.4e-132 476.9 348 69.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.4e-132 476.1 358 67.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.4e-132 476.1 365 65.5
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 9.0e-132 474.2 356 67.4
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 2.6e-131 472.6 387 64.6
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.6e-131 472.6 355 68.5
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.4e-131 472.2 355 68.2
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 3.4e-131 472.2 356 67.4
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 7.6e-131 471.1 358 66.8
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 3.8e-130 468.8 357 68.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 6.5e-130 468.0 356 65.2
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 6.5e-130 468.0 358 65.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 8.4e-130 467.6 352 69.0
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.4e-129 466.8 346 69.1
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.4e-129 466.8 356 66.9
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.9e-129 466.5 358 67.9
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.5e-129 466.1 358 64.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.0e-127 460.7 355 67.3
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.0e-127 460.7 347 68.0
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.3e-127 459.5 362 64.6
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.3e-127 459.5 362 64.9
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.3e-127 459.5 362 64.9
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 3.9e-127 458.8 358 66.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 3.9e-127 458.8 364 64.3
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 3.9e-127 458.8 364 64.3
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 6.7e-127 458.0 353 67.7
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 3.3e-126 455.7 350 66.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 4.3e-126 455.3 340 68.8
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 5.7e-126 454.9 352 67.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 2.1e-125 453.0 347 67.1
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.1e-124 450.7 350 66.0
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.8e-124 449.9 354 67.5
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 5.3e-124 448.4 375 62.9
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.5e-123 446.8 355 63.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.7e-122 443.4 362 62.4
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.2e-122 443.0 374 60.4
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 5.0e-122 441.8 356 66.6
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.9e-121 439.9 355 64.2
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 3.9e-119 432.2 354 63.8
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.3e-117 427.2 366 62.0
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 6.3e-117 424.9 331 65.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 9.0e-116 421.0 358 62.8
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.5e-115 420.2 357 60.5
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.7e-114 416.8 348 60.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.7e-114 416.8 356 59.6
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 2.2e-114 416.4 358 61.7
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.8e-114 415.6 359 60.7
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.1e-113 414.1 367 60.5
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 1.4e-113 413.7 360 61.1
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.5e-113 412.9 362 61.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 1.2e-112 410.6 360 60.6
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 2.1e-112 409.8 354 61.6
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 6.1e-112 408.3 354 61.6
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 6.1e-112 408.3 361 60.4
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.0e-111 407.5 360 60.3
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 2.3e-111 406.4 352 59.9
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.1e-110 404.1 369 58.0
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.5e-110 403.7 369 58.8
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.2e-109 399.8 351 57.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 8.2e-109 397.9 370 60.8
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 8.2e-109 397.9 356 60.4
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.4e-108 397.1 359 58.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 5.3e-108 395.2 337 63.8
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 3.6e-104 382.5 337 61.1
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 7.9e-104 381.3 337 60.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 2.3e-103 379.8 337 60.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.0e-103 379.4 362 58.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.7e-103 378.3 336 61.3
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.0e-98 364.4 340 57.6
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.9e-98 362.8 213 91.1
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.7e-96 356.3 250 70.0
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-96 355.9 213 90.1
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 4.7e-96 355.5 237 75.5
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 6.7e-95 351.7 235 74.0
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.8e-95 351.3 213 88.3
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.2e-80 304.3 354 49.2
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.4e-79 300.8 227 68.7
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 8.8e-79 298.1 354 48.6
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 7.0e-76 288.5 313 52.4
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 6.6e-74 282.0 163 78.5
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 4.7e-72 275.8 352 42.3
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 5.4e-68 262.3 213 66.2
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.0e-67 260.4 371 40.4
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.3e-66 257.7 218 64.2
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.9e-65 253.8 218 59.6
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.4e-62 242.7 216 65.3
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.4e-60 235.7 120 96.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.2e-56 224.6 304 44.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 2.4e-52 210.3 143 74.8
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 3.7e-45 186.4 243 46.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.6e-43 179.5 377 31.6
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.7e-42 177.6 145 57.9
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 5.6e-33 146.0 165 42.4
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-28 129.8 66 98.5
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.1e-26 122.9 66 92.4
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.8e-22 109.4 66 86.4
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.2e-12 77.0 52 65.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.6e-11 74.7 53 66.0
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 2.7e-11 73.9 70 54.3
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 73.6 56 62.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 3.0e-10 70.5 117 41.0
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 3.0e-10 70.5 56 60.7
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 3.9e-10 70.1 159 30.2
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 2.4e-07 60.8 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 2.4e-07 60.8 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 2.4e-07 60.8 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 2.4e-07 60.8 49 59.2


User provided reference genes

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