Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 0.0e+00 1275.0 649 100.0
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 0.0e+00 1079.3 652 83.7
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.0e-302 1042.0 651 81.6
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.0e-299 1031.9 650 80.9
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 7.8e-283 976.9 632 79.6
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.2e-277 958.7 597 85.3
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.4e-268 929.5 649 73.0
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 2.3e-258 895.6 621 72.0
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.9e-257 892.5 651 68.5
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.8e-256 888.6 602 74.8
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.4e-255 886.3 653 68.5
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 9.3e-252 873.6 652 68.1
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 3.5e-251 871.7 653 68.3
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.0e-250 868.6 650 68.2
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 3.0e-250 868.6 652 69.2
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 1.3e-248 863.2 652 67.2
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 2.8e-248 862.1 645 68.1
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 6.2e-248 860.9 650 67.2
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 8.1e-248 860.5 652 66.9
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 4.0e-247 858.2 652 67.0
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 8.4e-245 850.5 654 66.5
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.5e-244 849.0 654 65.0
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.2e-243 846.7 652 65.8
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 3.0e-242 842.0 610 71.8
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 3.0e-242 842.0 652 66.4
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 3.0e-242 842.0 652 66.1
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.9e-241 839.3 652 65.8
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.5e-241 839.0 654 65.4
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 5.7e-241 837.8 652 66.4
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 5.7e-241 837.8 677 64.0
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 2.8e-240 835.5 677 63.5
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 2.8e-240 835.5 661 65.4
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.8e-240 834.7 677 63.8
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 3.1e-239 832.0 674 64.4
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 3.1e-239 832.0 632 66.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 5.3e-239 831.2 652 65.8
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.8e-238 827.8 675 63.3
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.3e-237 826.6 652 65.8
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 2.2e-237 825.9 652 64.1
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 3.8e-237 825.1 651 65.1
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 9.3e-236 820.5 677 62.6
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 7.9e-235 817.4 651 63.9
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 5.1e-234 814.7 651 65.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 6.7e-234 814.3 650 64.8
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 6.3e-232 807.7 652 61.2
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.8e-231 806.2 686 61.5
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 4.1e-231 805.1 652 61.5
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 5.3e-231 804.7 633 65.7
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 5.3e-231 804.7 649 62.7
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 2.6e-230 802.4 621 66.2
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 3.4e-230 802.0 652 63.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 1.7e-229 799.7 651 63.6
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.8e-229 798.5 649 62.6
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 6.5e-229 797.7 652 61.5
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 1.1e-228 797.0 652 62.0
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 7.2e-228 794.3 652 62.7
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 1.2e-227 793.5 652 60.6
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 2.1e-227 792.7 652 62.1
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 6.1e-227 791.2 633 64.5
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 1.8e-226 789.6 650 62.8
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 6.7e-226 787.7 652 62.4
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 8.8e-226 787.3 653 61.1
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 4.3e-225 785.0 650 62.0
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 4.3e-225 785.0 651 62.4
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 9.7e-225 783.9 652 63.8
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.7e-224 783.1 652 62.3
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 8.2e-224 780.8 648 61.0
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 1.4e-223 780.0 636 64.0
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.6e-222 775.8 649 61.6
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 3.4e-222 775.4 636 63.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 7.7e-222 774.2 652 61.3
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.7e-221 773.1 647 62.6
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.2e-219 766.9 619 64.5
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 3.6e-219 765.4 653 60.9
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 5.1e-218 761.5 653 60.6
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 2.0e-217 759.6 650 60.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.7e-216 755.4 652 60.3
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 4.8e-216 755.0 617 63.4
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 1.4e-215 753.4 634 61.8
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 3.1e-215 752.3 655 60.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.6e-214 749.2 632 61.7
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.2e-213 746.1 698 57.9
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 4.0e-210 735.3 652 60.0
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.1e-209 733.8 652 58.4
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 1.3e-208 730.3 657 59.4
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.8e-208 729.2 654 59.9
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 1.8e-207 726.5 654 59.9
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 2.4e-207 726.1 654 59.9
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 3.1e-207 725.7 654 60.1
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 7.0e-207 724.5 654 59.8
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.0e-205 720.7 654 59.8
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 1.0e-205 720.7 654 59.6
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 6.5e-205 718.0 654 59.0
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 3.2e-204 715.7 654 59.2
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 1.2e-203 713.8 654 59.0
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.6e-203 712.2 356 99.4
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.6e-203 712.2 535 72.9
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 7.5e-201 704.5 653 58.3
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 3.1e-199 699.1 672 56.2
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.5e-193 680.2 575 65.6
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.1e-188 664.1 572 61.2
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 2.8e-187 659.4 652 53.7
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.7e-181 640.2 659 51.1
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 8.0e-179 631.3 571 57.8
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.1e-175 620.9 649 53.5
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.4e-175 620.5 614 53.6
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 7.3e-164 581.6 456 64.0
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 5.8e-161 572.0 652 48.9
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 2.5e-148 530.0 508 58.1
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 2.1e-126 457.2 658 46.5
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.0e-117 428.3 361 62.3
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.1e-102 377.5 683 35.4
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.8e-99 367.1 694 35.6
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.4e-90 337.4 655 35.4
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.3e-90 336.3 334 53.0
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 6.1e-86 322.8 331 51.4
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.6e-81 308.1 303 56.4
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 9.5e-79 298.9 451 39.9
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.1e-66 256.9 246 54.9
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.6e-65 255.0 288 52.1
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 1.3e-51 208.8 273 49.5
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 3.0e-48 197.6 254 42.9
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.8e-45 188.3 163 57.1
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 3.8e-35 154.1 281 33.5
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 4.6e-33 147.1 129 60.5
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 2.1e-25 121.7 530 26.0
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 9.9e-20 102.8 303 30.7
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.1e-15 89.4 65 73.8
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 3.1e-13 81.3 101 45.5
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 7.6e-12 76.6 101 44.6
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 7.1e-10 70.1 98 36.7
Cre03.g201664 Chlamydomonas reinhardtii HOM05D005666 ORTHO05D143906 7.9e-09 66.6 443 22.8


User provided reference genes

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