Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 4.8e-39 164.1 85 100.0
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.4e-38 161.8 85 98.8
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 4.3e-32 141.0 80 93.8
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.6e-32 140.6 80 92.5
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 5.3e-30 134.0 80 85.0
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 2.0e-29 132.1 80 85.0
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 2.0e-29 132.1 80 83.8
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 2.6e-29 131.7 80 82.5
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 2.6e-29 131.7 80 83.8
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 2.6e-29 131.7 80 83.8
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 3.4e-29 131.3 80 83.8
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 3.4e-29 131.3 80 82.5
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 3.4e-29 131.3 80 83.8
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 4.5e-29 131.0 80 83.8
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 5.8e-29 130.6 80 83.8
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 5.8e-29 130.6 80 82.5
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 5.8e-29 130.6 80 81.2
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 7.6e-29 130.2 80 83.8
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 7.6e-29 130.2 80 82.5
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 9.9e-29 129.8 80 81.2
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 9.9e-29 129.8 80 82.5
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.3e-28 129.4 80 82.5
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.3e-28 129.4 80 81.2
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 1.7e-28 129.0 80 82.5
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.2e-28 128.6 80 82.5
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 2.2e-28 128.6 80 80.0
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 2.2e-28 128.6 80 80.0
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 2.9e-28 128.3 80 82.5
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.9e-28 128.3 80 80.0
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 2.9e-28 128.3 80 80.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 2.9e-28 128.3 79 82.3
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 3.8e-28 127.9 80 78.8
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 4.9e-28 127.5 80 81.2
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 4.9e-28 127.5 80 80.0
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 4.9e-28 127.5 80 80.0
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 6.4e-28 127.1 80 81.2
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 6.4e-28 127.1 78 82.1
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 6.4e-28 127.1 80 81.2
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 8.4e-28 126.7 80 81.2
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 8.4e-28 126.7 80 81.2
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 8.4e-28 126.7 80 77.5
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 1.1e-27 126.3 80 80.0
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.1e-27 126.3 80 78.8
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.1e-27 126.3 79 82.3
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.1e-27 126.3 80 77.5
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.4e-27 125.9 80 81.2
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.4e-27 125.9 80 80.0
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.4e-27 125.9 80 78.8
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.9e-27 125.6 80 78.8
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 1.9e-27 125.6 80 81.2
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.9e-27 125.6 80 76.2
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 76.2
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 80.0
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 80.0
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 80.0
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 80.0
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 80.0
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 75.0
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 2.4e-27 125.2 80 77.5
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 3.2e-27 124.8 80 76.2
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 3.2e-27 124.8 80 78.8
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 3.2e-27 124.8 80 78.8
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 3.2e-27 124.8 80 77.5
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 4.2e-27 124.4 80 77.5
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 5.5e-27 124.0 80 78.8
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 5.5e-27 124.0 80 78.8
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 7.1e-27 123.6 80 78.8
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 9.3e-27 123.2 78 79.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.2e-26 122.9 80 77.5
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 77.5
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 76.2
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 78.8
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 78.8
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 77.5
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 1.2e-26 122.9 80 77.5
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 1.6e-26 122.5 80 78.8
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 2.1e-26 122.1 80 78.8
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 2.1e-26 122.1 80 77.5
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 3.5e-26 121.3 80 78.8
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 3.5e-26 121.3 80 77.5
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 4.6e-26 120.9 80 78.8
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 4.6e-26 120.9 80 78.8
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 4.6e-26 120.9 80 76.2
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 4.6e-26 120.9 80 76.2
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 6.0e-26 120.6 80 75.0
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 6.0e-26 120.6 80 75.0
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 7.9e-26 120.2 79 78.5
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.8e-25 119.0 80 73.8
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 1.8e-25 119.0 79 75.9
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.8e-25 119.0 80 73.8
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 2.3e-25 118.6 82 70.7
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 6.7e-25 117.1 80 72.5
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 6.7e-25 117.1 80 72.5
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 5.6e-24 114.0 80 70.0
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 9.0e-22 106.7 76 71.1
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 2.2e-20 102.1 78 65.4
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 2.5e-19 98.6 80 60.0
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 4.2e-19 97.8 57 86.0
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 7.9e-18 93.6 80 63.8
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 1.9e-16 89.0 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 2.2e-15 85.5 76 53.9
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 2.8e-15 85.1 50 84.0
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.1e-14 81.6 78 61.5
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 4.1e-14 81.3 79 58.2
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 6.9e-14 80.5 64 62.5
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 3.4e-13 78.2 49 81.6
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.2e-12 75.5 54 70.4
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 8.5e-12 73.6 52 71.2
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 1.4e-11 72.8 49 73.5
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 4.1e-06 54.7 36 63.9


User provided reference genes

Program Settings