Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.6e-87 325.5 176 100.0
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 8.5e-83 310.5 176 96.6
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 5.7e-63 244.6 176 75.6
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.1e-61 240.4 176 76.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.8e-57 225.7 166 74.1
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 5.0e-51 204.9 176 64.8
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 3.3e-50 202.2 176 64.2
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 3.3e-50 202.2 178 65.2
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 3.6e-49 198.7 176 64.2
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.1e-48 197.2 184 63.0
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 1.1e-48 197.2 150 70.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 3.1e-48 195.7 175 65.1
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 3.1e-48 195.7 176 64.2
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 8.9e-48 194.1 176 58.0
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 8.9e-48 194.1 176 61.4
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 3.4e-47 192.2 176 62.5
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 1.3e-46 190.3 176 61.4
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 1.7e-46 189.9 176 62.5
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.7e-46 189.9 176 60.2
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.2e-46 189.5 175 61.1
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 3.7e-46 188.7 176 58.0
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 6.4e-46 188.0 176 59.1
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.9e-45 186.4 176 57.4
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 3.2e-45 185.7 176 58.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 4.1e-45 185.3 176 59.1
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 4.1e-45 185.3 177 61.6
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 5.4e-45 184.9 174 62.1
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 7.0e-45 184.5 176 58.0
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 7.0e-45 184.5 176 56.8
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.2e-44 183.7 176 60.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 2.7e-44 182.6 168 61.3
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 7.8e-44 181.0 186 57.5
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.7e-43 179.9 181 57.5
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 3.9e-43 178.7 176 57.4
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 6.6e-43 177.9 176 57.4
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 1.9e-42 176.4 176 56.8
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 4.7e-41 171.8 179 53.6
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 4.7e-41 171.8 176 56.8
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 6.2e-41 171.4 176 57.4
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 8.1e-41 171.0 176 56.8
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.8e-40 169.9 178 55.6
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.8e-40 169.9 176 55.1
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 2.3e-40 169.5 178 56.2
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 2.3e-40 169.5 179 54.2
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 3.1e-40 169.1 176 54.5
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 4.0e-40 168.7 178 55.1
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 5.2e-40 168.3 165 52.7
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 5.2e-40 168.3 176 54.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 6.8e-40 167.9 173 57.2
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.2e-39 167.2 179 53.1
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.0e-39 166.4 165 58.8
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 3.4e-39 165.6 165 52.1
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 4.4e-39 165.2 176 54.5
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 7.1e-37 157.9 176 54.5
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.2e-36 157.1 144 57.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.2e-36 157.1 181 51.4
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 1.2e-36 157.1 178 52.2
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 2.1e-36 156.4 176 52.3
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 1.7e-35 153.3 176 52.3
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 1.7e-35 153.3 176 50.6
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 3.9e-35 152.1 176 51.1
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 5.1e-35 151.8 176 52.3
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 5.1e-35 151.8 176 51.7
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.5e-34 150.2 176 51.7
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 3.6e-33 145.6 176 46.0
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 3.1e-32 142.5 126 64.3
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 6.8e-32 141.4 142 52.8
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 8.9e-32 141.0 204 44.6
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 8.9e-32 141.0 176 48.9
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 8.9e-32 141.0 176 48.9
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 8.9e-32 141.0 176 48.9
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.5e-31 140.2 176 54.0
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 2.0e-31 139.8 176 47.7
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 2.0e-31 139.8 169 45.6
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 2.6e-31 139.4 177 50.8
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 3.4e-31 139.0 177 48.0
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 3.4e-31 139.0 177 48.0
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 4.4e-31 138.7 179 50.3
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 1.7e-30 136.7 174 46.6
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 1.4e-29 133.7 182 45.1
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.4e-29 132.9 177 49.2
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 4.1e-29 132.1 184 45.1
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 4.1e-29 132.1 177 49.7
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 4.1e-29 132.1 177 49.7
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 1.2e-28 130.6 177 48.6
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 7.8e-28 127.9 186 46.8
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.3e-27 127.1 172 44.8
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 5.1e-27 125.2 184 41.8
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 8.7e-27 124.4 180 42.8
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 1.1e-26 124.0 183 44.3
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 1.1e-26 124.0 186 45.7
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.5e-26 123.6 218 36.2
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 4.3e-26 122.1 183 40.4
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 5.6e-26 121.7 186 42.5
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 5.2e-24 115.2 125 48.8
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.5e-23 113.6 143 46.2
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.3e-22 110.5 129 49.6
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 3.8e-22 109.0 116 50.0
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 1.1e-21 107.5 103 56.3
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 2.4e-21 106.3 166 44.0
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 3.2e-21 105.9 146 41.1
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 2.1e-20 103.2 119 52.1
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 2.3e-19 99.8 110 48.2
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 3.9e-19 99.0 167 41.3
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 5.1e-19 98.6 181 36.5
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 4.5e-15 85.5 170 31.8
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 4.5e-15 85.5 96 47.9
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 1.4e-13 80.5 176 35.8
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 4.2e-13 79.0 85 50.6
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 5.4e-13 78.6 46 82.6
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 9.3e-13 77.8 144 40.3
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 2.1e-12 76.6 136 33.8
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 6.0e-12 75.1 177 38.4
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 5.1e-11 72.0 74 54.1
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 2.5e-10 69.7 69 53.6
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 4.3e-10 68.9 170 27.6
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.3e-09 67.4 56 67.9
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 8.1e-09 64.7 126 34.9
Aqoxy3G03161 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 1.5e-07 60.5 156 30.1
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 3.4e-07 59.3 185 30.3


User provided reference genes

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