Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.9e-69 265.8 140 100.0
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 4.9e-49 198.0 142 78.9
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.9e-48 196.1 142 78.2
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 9.2e-48 193.7 142 77.5
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 3.0e-46 188.7 142 74.6
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 6.6e-46 187.6 142 73.9
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 1.9e-45 186.0 142 73.2
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.5e-45 185.7 142 73.2
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 3.3e-45 185.3 142 72.5
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 4.3e-45 184.9 142 73.2
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 9.6e-45 183.7 142 73.9
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 2.1e-44 182.6 142 71.8
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 2.1e-44 182.6 142 71.1
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.1e-44 182.6 142 71.1
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.8e-44 182.2 142 70.4
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.8e-44 182.2 142 70.4
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 2.8e-44 182.2 142 71.8
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 2.8e-44 182.2 142 71.1
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 3.6e-44 181.8 142 70.4
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 3.6e-44 181.8 142 73.2
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 4.7e-44 181.4 142 71.1
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 4.7e-44 181.4 142 71.1
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 4.7e-44 181.4 142 70.4
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 6.2e-44 181.0 142 71.8
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 6.2e-44 181.0 142 71.8
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 6.2e-44 181.0 142 71.1
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 6.2e-44 181.0 142 70.4
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 6.2e-44 181.0 142 69.0
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 8.1e-44 180.6 142 72.5
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 8.1e-44 180.6 142 72.5
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 8.1e-44 180.6 142 69.7
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 8.1e-44 180.6 142 71.8
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 1.1e-43 180.3 142 73.2
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 1.1e-43 180.3 142 73.2
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 1.1e-43 180.3 142 70.4
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 1.1e-43 180.3 142 73.2
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 1.4e-43 179.9 142 70.4
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.4e-43 179.9 142 70.4
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 1.8e-43 179.5 142 71.1
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 1.8e-43 179.5 142 70.4
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 2.4e-43 179.1 142 71.1
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.4e-43 179.1 142 71.1
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 2.4e-43 179.1 142 69.0
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 2.4e-43 179.1 142 71.1
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 3.1e-43 178.7 142 68.3
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 4.0e-43 178.3 142 71.8
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 5.2e-43 177.9 142 72.5
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 5.2e-43 177.9 142 71.8
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 5.2e-43 177.9 142 69.7
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 5.2e-43 177.9 142 71.1
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 6.9e-43 177.6 142 71.1
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 8.9e-43 177.2 142 70.4
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.2e-42 176.8 142 70.4
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 1.2e-42 176.8 142 71.1
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 1.2e-42 176.8 142 70.4
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 1.2e-42 176.8 142 68.3
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 1.5e-42 176.4 142 69.0
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 2.0e-42 176.0 142 68.3
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 2.0e-42 176.0 142 71.1
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 2.6e-42 175.6 141 68.8
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.6e-42 175.6 142 68.3
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 2.6e-42 175.6 142 68.3
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 3.4e-42 175.3 142 71.8
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 3.4e-42 175.3 137 71.5
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 3.4e-42 175.3 142 67.6
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 3.4e-42 175.3 147 69.4
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 4.4e-42 174.9 141 70.9
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 4.4e-42 174.9 142 70.4
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 5.8e-42 174.5 142 69.0
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 5.8e-42 174.5 142 71.8
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 5.8e-42 174.5 142 71.8
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 9.9e-42 173.7 142 67.6
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 1.3e-41 173.3 142 67.6
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 2.2e-41 172.6 142 67.6
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 2.9e-41 172.2 142 68.3
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 2.9e-41 172.2 142 67.6
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 2.9e-41 172.2 142 67.6
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 2.9e-41 172.2 142 66.9
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 3.8e-41 171.8 142 67.6
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 6.4e-41 171.0 142 66.9
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 6.4e-41 171.0 142 66.2
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 6.4e-41 171.0 142 66.2
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 8.4e-41 170.6 142 66.2
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.1e-40 170.2 146 65.1
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 1.9e-40 169.5 142 67.6
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.4e-40 169.1 142 66.2
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 2.4e-40 169.1 142 65.5
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.4e-40 169.1 142 67.6
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 65.5
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 65.5
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 65.5
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 65.5
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 65.5
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 66.2
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 67.6
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 66.2
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 4.2e-40 168.3 142 66.9
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 5.4e-40 167.9 142 66.2
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 5.4e-40 167.9 142 66.2
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 5.4e-40 167.9 142 65.5
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 5.4e-40 167.9 142 65.5
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 7.1e-40 167.5 142 64.8
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 1.6e-39 166.4 141 66.0
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 3.5e-39 165.2 142 64.1
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 1.7e-38 162.9 143 63.6
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 2.3e-38 162.5 142 59.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 3.0e-38 162.2 142 64.8
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 3.0e-38 162.2 141 63.8
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 7.3e-37 157.5 142 63.4
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 1.4e-35 153.3 126 70.6
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 2.4e-35 152.5 142 62.0
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 7.6e-34 147.5 141 57.4
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.1e-32 143.7 142 56.3
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 7.1e-32 141.0 142 53.5
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 7.1e-32 141.0 142 53.5
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 4.8e-28 128.3 126 61.9
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 8.4e-25 117.5 107 63.6
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 5.5e-24 114.8 142 43.7
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 3.0e-22 109.0 142 42.3
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 1.2e-07 60.5 119 26.9
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.0e-06 57.4 145 26.9
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.0e-06 55.8 104 41.3


User provided reference genes

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