Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.3e-162 575.5 287 100.0
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-159 566.6 287 99.0
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 2.1e-118 429.5 287 77.4
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 6.8e-114 414.5 290 74.1
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 9.9e-113 410.6 290 74.1
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.6e-110 403.3 243 80.2
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.1e-110 402.9 289 73.7
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.6e-110 401.7 295 72.2
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 6.0e-110 401.4 287 73.2
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.3e-109 400.2 291 71.1
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.3e-109 400.2 239 81.2
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.3e-109 400.2 287 72.8
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.7e-109 399.8 295 72.5
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 3.0e-109 399.1 287 72.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 6.6e-109 397.9 254 79.1
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.6e-109 397.9 299 71.6
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.6e-109 397.5 249 79.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.5e-108 396.7 255 77.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.5e-108 396.7 297 70.7
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.9e-108 396.4 289 70.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.9e-108 396.4 263 76.4
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.9e-108 396.4 293 72.0
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.3e-108 395.6 237 82.3
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 4.3e-108 395.2 243 80.7
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 4.3e-108 395.2 291 73.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.6e-108 394.8 278 72.7
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.2e-107 393.7 288 71.9
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 4.7e-107 391.7 332 66.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 4.7e-107 391.7 289 72.0
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 6.2e-107 391.3 239 80.8
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 6.2e-107 391.3 273 75.1
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 8.1e-107 391.0 288 73.3
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.1e-106 390.6 283 72.8
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.1e-106 390.6 270 76.3
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.4e-106 390.2 254 77.6
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.8e-106 389.8 254 75.2
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.8e-106 389.8 289 72.0
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.8e-106 389.8 298 69.1
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.4e-106 389.4 275 73.5
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 4.0e-106 388.7 300 70.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.0e-106 388.7 292 71.2
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.2e-106 388.3 237 81.0
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 5.2e-106 388.3 289 72.0
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 5.2e-106 388.3 287 71.1
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 5.2e-106 388.3 299 68.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 6.8e-106 387.9 273 73.3
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 8.9e-106 387.5 288 71.2
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.5e-105 386.7 264 73.9
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.0e-105 386.3 290 71.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 4.4e-105 385.2 297 69.0
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 9.9e-105 384.0 287 69.0
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.2e-104 382.9 287 70.0
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 4.9e-104 381.7 258 74.0
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 8.4e-104 380.9 235 80.4
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.1e-103 380.6 288 70.5
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.9e-103 379.8 247 75.7
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 5.4e-103 378.3 284 69.4
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 5.4e-103 378.3 289 71.3
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 5.4e-103 378.3 289 69.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 7.1e-103 377.9 290 70.7
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.1e-102 376.3 289 68.9
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 2.7e-102 375.9 240 76.7
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 2.7e-102 375.9 238 75.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.0e-101 374.0 286 68.2
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 1.3e-101 373.6 300 66.7
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 1.7e-101 373.2 247 75.3
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 3.9e-101 372.1 292 67.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 3.9e-101 372.1 292 67.8
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 3.9e-101 372.1 294 68.4
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.9e-101 372.1 235 77.9
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 5.1e-101 371.7 232 78.9
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 6.6e-101 371.3 292 67.1
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 1.1e-100 370.5 235 76.6
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.5e-100 370.2 293 67.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.5e-100 370.2 293 67.9
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.9e-100 369.8 314 65.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 3.3e-100 369.0 288 68.8
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 3.3e-100 369.0 290 66.6
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.3e-100 368.6 236 76.7
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.3e-100 368.6 233 76.8
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 7.3e-100 367.9 210 84.8
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.6e-99 366.7 294 66.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 2.8e-99 365.9 235 76.2
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 4.7e-99 365.2 284 69.0
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 8.1e-99 364.4 262 71.8
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.8e-98 363.2 280 69.3
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 2.4e-98 362.8 375 56.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 6.9e-98 361.3 296 66.6
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.0e-98 360.9 292 66.4
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.2e-97 360.5 245 72.7
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.4e-97 358.6 282 67.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 4.4e-97 358.6 282 67.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 5.8e-97 358.2 240 75.4
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 9.9e-97 357.5 348 60.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-96 357.1 282 67.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.8e-90 336.7 251 69.3
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 1.5e-89 333.6 236 69.5
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.9e-87 326.6 298 62.4
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 5.4e-87 325.1 234 67.1
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.8e-83 312.0 234 69.2
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.7e-78 296.2 216 71.8
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 3.7e-75 285.8 236 59.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.4e-74 283.1 240 58.3
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 3.1e-74 282.7 229 68.6
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 9.3e-71 271.2 202 62.9
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 6.7e-69 265.0 228 62.3
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.6e-67 260.4 166 75.9
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 2.5e-63 246.5 210 59.0
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.3e-45 186.8 281 43.8
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.2e-36 157.9 169 53.8
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.1e-34 149.8 95 80.0
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 9.4e-31 138.3 152 43.4
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.6e-30 137.5 200 40.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.8e-29 134.0 158 41.8
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 3.0e-29 133.3 93 73.1
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 3.4e-28 129.8 142 50.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 5.9e-25 119.0 131 45.8
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 7.8e-09 65.5 88 46.6
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.3e-08 63.9 119 35.3
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 1.2e-06 58.2 101 34.7


User provided reference genes

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