Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.9e-194 682.2 315 100.0
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 5.1e-171 604.4 315 88.9
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.5e-170 602.1 315 88.6
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.3e-170 601.7 315 88.6
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 5.7e-154 547.7 315 83.5
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.1e-60 236.9 386 35.2
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.8e-60 236.5 386 36.0
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.8e-57 226.1 291 40.9
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.8e-57 226.1 386 36.0
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-52 210.3 372 33.9
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 1.2e-50 204.5 295 41.4
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.3e-44 184.5 216 41.2
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 6.5e-41 172.2 401 30.9
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-40 169.5 394 30.5
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 5.1e-38 162.5 406 30.3
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 6.3e-36 155.6 405 28.6
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-35 154.1 392 31.4
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-34 151.4 383 30.3
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.7e-34 148.7 349 31.2
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-30 137.9 318 31.8
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 6.7e-30 135.6 375 28.5
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.6e-29 133.7 341 30.8
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 4.8e-28 129.4 208 33.2
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.8e-28 129.4 385 26.2
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 1.8e-27 127.5 355 27.6
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.0e-26 124.0 237 34.2
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-25 121.3 394 25.6
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-25 120.6 363 26.4
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 2.9e-25 120.2 367 24.8
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 5.0e-25 119.4 217 33.6
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 6.5e-25 119.0 408 25.2
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.9e-24 117.5 392 24.7
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 4.2e-24 116.3 198 32.8
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.2e-24 116.3 212 34.0
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 1.2e-23 114.8 218 32.6
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 1.6e-23 114.4 398 25.1
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.7e-23 113.6 207 33.3
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.6e-23 113.2 156 37.2
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.1e-23 112.5 341 29.0
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 8.0e-23 112.1 220 33.2
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.0e-22 111.7 231 30.7
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-22 110.9 343 28.0
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-22 110.9 223 31.8
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.0e-22 110.2 223 31.4
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 3.9e-22 109.8 217 33.2
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 8.8e-22 108.6 385 22.9
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.5e-21 107.8 235 34.0
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.0e-21 107.5 207 34.8
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.0e-21 107.5 218 30.3
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 3.3e-21 106.7 207 32.4
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 3.3e-21 106.7 217 31.8
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.7e-21 105.9 212 34.4
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.7e-20 104.4 390 26.9
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 3.7e-20 103.2 216 30.1
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-19 100.9 214 32.2
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.1e-19 100.1 293 27.3
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.1e-19 99.8 216 33.3
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 1.6e-18 97.8 68 60.3
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 7.7e-18 95.5 117 44.4
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.7e-17 94.4 411 24.1
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-17 94.0 118 44.1
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 6.5e-17 92.4 241 29.5
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.2e-16 90.1 147 36.1
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 3.2e-16 90.1 153 34.6
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.5e-16 89.4 371 23.7
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-15 88.2 77 49.4
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 2.7e-15 87.0 179 31.3
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-15 87.0 129 37.2
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 3.6e-15 86.7 161 32.9
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.0e-15 85.5 360 23.6
PSO478G1223 Papaver somniferum HOM05D008691 ORTHO05D005947 3.0e-14 83.6 228 33.8
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 6.7e-14 82.4 226 28.8
COL.COLO4_03807 Corchorus olitorius HOM05D023542 ORTHO05D005947 8.8e-14 82.0 274 28.1
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 8.8e-14 82.0 265 26.4
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.5e-13 81.3 336 23.8
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 3.3e-13 80.1 192 29.2
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 5.7e-13 79.3 161 31.1
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 9.7e-13 78.6 217 30.0
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-12 77.4 162 31.5
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 2.8e-12 77.0 153 28.8
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 3.7e-12 76.6 159 35.8
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.8e-12 76.3 118 38.1
Actinidia01716 Actinidia chinensis HOM05D007560 ORTHO05D005947 8.2e-12 75.5 55 60.0
Aqoxy5G01433 Aquilegia oxysepala HOM05D007560 ORTHO05D005947 1.1e-11 75.1 152 33.6
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-11 74.7 63 54.0
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 1.8e-11 74.3 199 28.1
Lj5P358T14 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-11 73.2 77 46.8
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 9.1e-11 72.0 203 27.6
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-10 71.6 213 24.4
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.6e-10 71.2 205 25.4
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.7e-10 68.9 213 23.9
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-09 67.4 95 34.7
PSO384G1299 Papaver somniferum HOM05D008691 ORTHO05D005947 2.9e-09 67.0 195 29.7
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-08 65.1 79 38.0
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.9e-08 64.3 200 25.0
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.5e-08 63.9 107 31.8
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 5.5e-08 62.8 165 26.7
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 7.2e-08 62.4 72 38.9
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 9.4e-08 62.0 221 30.8
COL.COLO4_10475 Corchorus olitorius HOM05D023542 ORTHO05D005947 1.2e-07 61.6 219 25.6
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-07 61.6 213 22.5
Lju967A0T15 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-07 60.5 130 28.5
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.6e-07 60.1 132 26.5
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 8.0e-07 58.9 186 25.3
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.0e-06 58.5 164 25.0
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-06 58.2 121 32.2
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.8e-06 57.8 257 24.1
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 2.3e-06 57.4 178 28.7
HanXRQChr08g0209381 Helianthus annuus HOM05D000007 ORTHO05D000521 4.0e-06 56.6 93 31.2
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 5.2e-06 56.2 206 26.7
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 5.2e-06 56.2 46 56.5
HanXRQChr00c0237g0572781 Helianthus annuus HOM05D000007 ORTHO05D000521 6.8e-06 55.8 147 25.9
HanXRQChr11g0327481 Helianthus annuus HOM05D000007 ORTHO05D000676 6.8e-06 55.8 147 25.9
arahy.Tifrunner.gnm1.ann1.AP71S7 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 55.5 60 45.0
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 8.8e-06 55.5 69 40.6
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 8.8e-06 55.5 70 42.9
PSO210G3980 Papaver somniferum HOM05D000007 ORTHO05D000676 8.8e-06 55.5 59 44.1
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 8.8e-06 55.5 116 25.9


User provided reference genes

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