Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 2.0e-46 189.1 120 100.0
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.7e-42 176.0 120 94.2
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 3.2e-25 118.6 120 58.3
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 8.8e-23 110.5 115 65.2
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 1.2e-22 110.2 125 52.0
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 7.5e-22 107.5 124 53.2
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 6.3e-21 104.4 123 63.4
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 2.0e-19 99.4 122 57.4
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 2.2e-18 95.9 120 58.3
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 1.1e-17 93.6 114 54.4
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 1.5e-17 93.2 122 46.7
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 1.5e-17 93.2 94 70.2
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 2.5e-17 92.4 131 51.1
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 9.4e-17 90.5 124 50.0
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 2.1e-16 89.4 111 50.5
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 2.1e-16 89.4 121 47.1
Rhsim03G0206100 Rhododendron simsii HOM05D043765 ORTHO05D009048 2.1e-16 89.4 111 49.5
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 2.3e-15 85.9 117 43.6
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 2.3e-15 85.9 117 44.4
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 4.0e-15 85.1 120 52.5
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 5.2e-15 84.7 117 43.6
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 5.2e-15 84.7 117 43.6
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 6.8e-15 84.3 123 44.7
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 2.6e-14 82.4 100 48.0
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 9.8e-14 80.5 95 47.4
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 9.8e-14 80.5 115 51.3
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.3e-13 80.1 125 40.8
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 1.3e-13 80.1 123 41.5
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 1.3e-13 80.1 123 42.3
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 1.7e-13 79.7 109 49.5
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 2.8e-13 79.0 126 41.3
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 2.8e-13 79.0 118 40.7
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 4.8e-13 78.2 120 40.8
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 4.8e-13 78.2 123 41.5
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 8.3e-13 77.4 118 41.5
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 1.1e-12 77.0 106 41.5
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 2.4e-12 75.9 123 43.1
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 5.4e-12 74.7 121 54.5
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 5.4e-12 74.7 91 48.4
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 5.4e-12 74.7 125 40.0
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 7.0e-12 74.3 33 90.9
Rhsim03G0207100 Rhododendron simsii HOM05D043765 ORTHO05D009048 9.1e-12 73.9 99 47.5
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 1.2e-11 73.6 123 39.8
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 1.2e-11 73.6 117 36.8
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 1.6e-11 73.2 125 42.4
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.6e-11 73.2 123 42.3
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 1.6e-11 73.2 119 41.2
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 4.5e-11 71.6 123 58.5
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 4.5e-11 71.6 122 56.6
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 4.5e-11 71.6 76 61.8
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 4.5e-11 71.6 103 49.5
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 5.9e-11 71.2 32 93.8
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 5.9e-11 71.2 91 45.1
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 5.9e-11 71.2 96 41.7
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 1.0e-10 70.5 32 90.6
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 1.0e-10 70.5 32 90.6
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 1.3e-10 70.1 32 90.6
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 1.3e-10 70.1 96 58.3
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 1.3e-10 70.1 32 90.6
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 1.7e-10 69.7 31 93.5
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 1.7e-10 69.7 31 93.5
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 1.7e-10 69.7 31 93.5
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 1.7e-10 69.7 31 93.5
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 1.7e-10 69.7 32 90.6
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 1.7e-10 69.7 123 37.4
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 1.7e-10 69.7 31 93.5
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.3e-10 69.3 122 55.7
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 2.3e-10 69.3 33 81.8
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 2.3e-10 69.3 32 87.5
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 3.8e-10 68.6 120 38.3
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 3.8e-10 68.6 32 87.5
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 3.8e-10 68.6 87 42.5
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 5.0e-10 68.2 31 87.1
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 5.0e-10 68.2 31 87.1
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 6.6e-10 67.8 33 81.8
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 6.6e-10 67.8 32 84.4
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 8.6e-10 67.4 120 45.8
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 1.1e-09 67.0 119 39.5
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 1.1e-09 67.0 32 87.5
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 1.5e-09 66.6 105 60.0
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 1.9e-09 66.2 123 36.6
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.5e-09 65.9 33 81.8
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 4.2e-09 65.1 33 78.8
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 7.2e-09 64.3 114 37.7
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 7.2e-09 64.3 32 81.2
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 9.5e-09 63.9 120 40.0
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 9.5e-09 63.9 29 82.8
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 2.1e-08 62.8 121 40.5
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 3.6e-08 62.0 106 54.7
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 1.4e-07 60.1 96 54.2
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 1.4e-07 60.1 122 39.3
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.4e-07 60.1 32 78.1
FAN01G1037 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.8e-07 59.7 31 77.4
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.8e-07 59.7 115 40.0
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 3.0e-07 58.9 92 52.2
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 5.2e-07 58.2 31 77.4
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 5.2e-07 58.2 31 77.4
CBR_g41366 Chara braunii HOM05D007326 ORTHO05D009048 1.5e-06 56.6 26 88.5
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 2.0e-06 56.2 75 44.0
Cre02.g073800 Chlamydomonas reinhardtii HOM05D007326 ORTHO05D009048 7.5e-06 54.3 31 71.0
HPP92_020021 Vanilla planifolia HOM05D007326 ORTHO05D009048 7.5e-06 54.3 33 72.7


User provided reference genes

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