Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 2.9e-75 285.0 133 100.0
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 7.1e-74 280.4 133 99.2
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 9.7e-39 163.7 135 66.7
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 3.5e-36 155.2 130 68.5
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 3.2e-34 148.7 133 60.2
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 4.2e-34 148.3 130 62.3
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 5.5e-34 147.9 130 61.5
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 1.8e-32 142.9 141 58.9
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 3.0e-32 142.1 141 58.2
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 8.8e-32 140.6 135 56.3
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 2.0e-31 139.4 133 60.2
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 2.6e-31 139.0 134 55.2
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 2.2e-30 136.0 134 56.0
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 1.8e-29 132.9 136 57.4
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 4.1e-29 131.7 141 56.0
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 5.3e-29 131.3 67 92.5
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 5.3e-29 131.3 139 50.4
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 5.3e-29 131.3 144 48.6
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 1.2e-28 130.2 136 56.6
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 2.0e-28 129.4 139 50.4
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 4.5e-28 128.3 137 56.2
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 5.9e-28 127.9 140 52.9
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 5.9e-28 127.9 137 55.5
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 7.7e-28 127.5 144 47.2
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 2.2e-27 125.9 136 53.7
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 2.9e-27 125.6 98 63.3
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 3.8e-27 125.2 137 54.7
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 5.0e-27 124.8 136 55.1
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.1e-26 123.6 144 45.1
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 1.9e-26 122.9 144 53.5
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 1.9e-26 122.9 100 63.0
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 1.9e-26 122.9 134 51.5
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 2.5e-26 122.5 100 64.0
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 2.5e-26 122.5 134 53.7
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 3.2e-26 122.1 134 53.0
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 3.2e-26 122.1 128 55.5
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 4.2e-26 121.7 134 53.7
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 7.2e-26 120.9 133 52.6
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 7.2e-26 120.9 133 52.6
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.2e-25 120.2 133 52.6
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 1.6e-25 119.8 124 54.8
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 3.6e-25 118.6 140 53.6
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 8.0e-25 117.5 135 50.4
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 8.0e-25 117.5 121 51.2
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 1.0e-24 117.1 136 50.0
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 1.4e-24 116.7 135 50.4
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 1.8e-24 116.3 134 50.0
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 2.3e-24 115.9 134 50.0
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.0e-23 112.8 140 51.4
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 2.0e-23 112.8 135 48.9
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.6e-23 112.5 137 50.4
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 3.4e-23 112.1 135 51.9
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 4.4e-23 111.7 137 49.6
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 9.8e-23 110.5 134 51.5
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 1.3e-22 110.2 100 57.0
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 5.4e-21 104.8 131 46.6
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 9.1e-21 104.0 116 47.4
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 2.0e-20 102.8 135 49.6
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 2.7e-20 102.4 135 49.6
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 3.5e-20 102.1 137 50.4
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.0e-19 100.5 136 49.3
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 1.1e-18 97.1 125 45.6
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 7.2e-18 94.4 103 52.4
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 2.8e-17 92.4 107 47.7
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 3.6e-17 92.0 114 45.6
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 4.7e-17 91.7 103 51.5
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 6.1e-17 91.3 125 47.2
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 1.4e-16 90.1 101 49.5
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 1.4e-16 90.1 101 49.5
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 2.3e-16 89.4 103 48.5
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 1.5e-15 86.7 140 41.4
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 1.5e-15 86.7 133 46.6
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.3e-14 83.6 127 40.2
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 2.0e-12 76.3 119 46.2
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 1.9e-10 69.7 108 38.0
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 2.5e-10 69.3 117 36.8
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 4.7e-09 65.1 55 58.2
MSTRG.2266 Avicennia marina HOM05D002803 ORTHO05D003089 2.0e-07 59.7 112 37.5
PSO135G0167 Papaver somniferum HOM05D002803 ORTHO05D003089 1.7e-06 56.6 142 33.1
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 2.9e-06 55.8 139 33.1
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 3.7e-06 55.5 132 32.6
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 3.7e-06 55.5 146 30.1
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 6.4e-06 54.7 49 53.1
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 6.4e-06 54.7 41 61.0
Cc11_g10690 Coffea canephora HOM05D002803 ORTHO05D003089 8.3e-06 54.3 41 56.1
Potri.010G130600 Populus trichocarpa HOM05D002803 ORTHO05D003089 8.3e-06 54.3 40 57.5
PGR102G2995 Punica granatum HOM05D002803 ORTHO05D003089 8.3e-06 54.3 35 65.7


User provided reference genes

Program Settings