Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006415 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 1.8e-34 148.7 72 100.0
CSS0016203 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 4.2e-20 100.9 68 72.1
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.2e-12 74.3 90 44.4
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-11 72.8 90 43.3
CiPaw.06G004900 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.6e-11 70.9 90 43.3
CiPaw.07G209500 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.6e-11 70.9 90 41.1
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.9e-11 70.1 90 43.3
CiPaw.07G018800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-10 68.6 90 40.0
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-10 68.6 88 39.8
CANSAT11G0363 Cannabis sativa HOM05D000096 ORTHO05D000045 3.0e-10 68.2 90 42.2
CiPaw.05G146400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.0e-10 68.2 90 37.8
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.0e-10 68.2 77 42.9
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.1e-10 67.4 90 37.8
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 8.8e-10 66.6 90 41.1
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 1.1e-09 66.2 90 40.0
SGA_v2.0_scaffold257G45688 Striga asiatica HOM05D000011 ORTHO05D000018 1.1e-09 66.2 90 44.4
CANSAT25G2856 Cannabis sativa HOM05D000096 ORTHO05D000045 1.5e-09 65.9 90 40.0
EL10Ac1g01294 Beta vulgaris HOM05D000096 ORTHO05D000045 2.5e-09 65.1 90 34.4
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 2.5e-09 65.1 91 38.5
CANSAT01G3138 Cannabis sativa HOM05D000096 ORTHO05D000045 2.5e-09 65.1 91 38.5
EL10Ac1g01899 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-09 64.7 90 33.3
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 3.3e-09 64.7 91 38.5
Hma1.2p1_1453F.1_g284330 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.7e-09 63.9 88 36.4
CANSAT35G1812 Cannabis sativa HOM05D000096 ORTHO05D000045 7.4e-09 63.5 91 35.2
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 7.4e-09 63.5 88 38.6
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.3e-08 62.8 86 39.5
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 1.7e-08 62.4 68 41.2
CiPaw.07G195500 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-08 61.6 90 42.2
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-08 61.6 46 58.7
CiPaw.04G088100 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-08 61.2 46 60.9
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-08 61.2 46 60.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 3.7e-08 61.2 90 41.1
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-08 60.5 38 68.4
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-08 60.5 39 64.1
EL10Ac4g08451 Beta vulgaris HOM05D000096 ORTHO05D000045 8.2e-08 60.1 90 31.1
EL10Ac5g10502 Beta vulgaris HOM05D000096 ORTHO05D000045 1.1e-07 59.7 90 30.0
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 1.1e-07 59.7 90 34.4
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-07 59.7 46 58.7
CiPaw.14G107300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-07 58.9 39 61.5
Migut.M00581 Erythranthe guttata HOM05D000096 ORTHO05D000045 1.8e-07 58.9 90 32.2
EL10Ac8g19361 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-07 58.5 43 53.5
Cc07_g19800 Coffea canephora HOM05D000096 ORTHO05D000045 2.4e-07 58.5 90 33.3
TPR.G7224 Trifolium pratense HOM05D000096 ORTHO05D000045 2.4e-07 58.5 94 30.9
EL10Ac2g03172 Beta vulgaris HOM05D000096 ORTHO05D000045 4.1e-07 57.8 90 32.2
Oeu022949.1 Olea europaea HOM05D000096 ORTHO05D000045 4.1e-07 57.8 88 35.2
Oeu058529.2 Olea europaea HOM05D000096 ORTHO05D000045 4.1e-07 57.8 88 35.2
Lsat_1_v5_gn_5_123540 Lactuca sativa HOM05D000096 ORTHO05D000045 5.3e-07 57.4 90 41.1
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-06 56.2 90 34.4
Sopen02g010400 Solanum pennellii HOM05D000096 ORTHO05D000045 2.0e-06 55.5 90 36.7
Sopen02g028420 Solanum pennellii HOM05D000096 ORTHO05D000901 2.0e-06 55.5 90 36.7
Sopen03g017760 Solanum pennellii HOM05D000096 ORTHO05D000045 2.0e-06 55.5 90 36.7
Sopen12g014760 Solanum pennellii HOM05D000096 ORTHO05D000045 2.0e-06 55.5 90 36.7
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 3.4e-06 54.7 39 53.8
Oeu038148.1 Olea europaea HOM05D000096 ORTHO05D000045 3.4e-06 54.7 90 32.2
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 4.5e-06 54.3 97 33.0
Medtr2g008500 Medicago truncatula HOM05D000096 ORTHO05D000045 5.9e-06 53.9 91 33.0
Medtr7g070710 Medicago truncatula HOM05D000096 ORTHO05D000045 5.9e-06 53.9 91 33.0
Glyma.10G096000 Glycine max HOM05D000096 ORTHO05D000045 7.7e-06 53.5 77 36.4


User provided reference genes

Program Settings