Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 4.0e-38 161.0 84 100.0
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.5e-32 141.7 84 89.3
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 8.0e-31 136.7 84 86.9
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.1e-30 136.3 84 82.1
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.3e-30 135.2 81 86.4
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 7.5e-29 130.2 85 80.0
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 3.2e-27 124.8 85 77.6
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 6.2e-23 110.5 92 68.5
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 4.0e-22 107.8 99 63.6
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 8.9e-22 106.7 88 63.6
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.2e-21 106.3 88 67.0
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 9.2e-19 96.7 87 59.8
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 4.6e-18 94.4 87 57.5
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 7.8e-18 93.6 90 61.1
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 7.8e-18 93.6 90 61.1
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.9e-17 91.3 90 60.0
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 8.6e-17 90.1 85 58.8
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.9e-16 89.0 81 58.0
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 7.3e-16 87.0 110 49.1
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 9.5e-16 86.7 88 53.4
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 4.7e-15 84.3 81 58.0
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 6.2e-15 84.0 110 48.2
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 8.1e-15 83.6 90 55.6
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 8.1e-15 83.6 86 58.1
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.4e-14 82.8 81 53.1
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.8e-14 82.4 88 56.8
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.8e-14 82.4 88 56.8
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 3.1e-14 81.6 89 52.8
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 4.0e-14 81.3 82 56.1
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 5.2e-14 80.9 88 56.8
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 5.2e-14 80.9 72 58.3
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 6.8e-14 80.5 88 52.3
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 8.9e-14 80.1 110 46.4
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 8.9e-14 80.1 110 46.4
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 8.9e-14 80.1 110 46.4
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 1.5e-13 79.3 88 55.7
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 1.5e-13 79.3 88 55.7
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 3.4e-13 78.2 111 46.8
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 3.4e-13 78.2 111 46.8
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 4.4e-13 77.8 84 53.6
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 5.8e-13 77.4 84 52.4
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 9.9e-13 76.6 87 50.6
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 1.3e-12 76.3 88 53.4
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 2.2e-12 75.5 87 50.6
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.8e-12 74.7 82 54.9
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 4.9e-12 74.3 88 51.1
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 6.4e-12 73.9 81 50.6
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 8.4e-12 73.6 93 48.4
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 8.4e-12 73.6 110 43.6
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 1.1e-11 73.2 88 51.1
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 1.4e-11 72.8 102 47.1
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 2.4e-11 72.0 110 43.6
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 3.2e-11 71.6 60 63.3
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 3.2e-11 71.6 85 50.6
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 3.2e-11 71.6 85 50.6
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 3.2e-11 71.6 87 47.1
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 5.4e-11 70.9 110 42.7
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 5.4e-11 70.9 86 52.3
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 7.1e-11 70.5 90 47.8
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 7.1e-11 70.5 83 49.4
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.2e-10 69.7 85 49.4
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 2.1e-10 68.9 111 43.2
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 2.1e-10 68.9 111 43.2
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 2.1e-10 68.9 111 43.2
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 2.7e-10 68.6 110 41.8
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 3.5e-10 68.2 121 38.8
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 3.5e-10 68.2 71 50.7
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 4.6e-10 67.8 83 47.0
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.6e-10 67.8 84 47.6
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 6.0e-10 67.4 72 51.4
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 6.0e-10 67.4 87 51.7
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.3e-09 66.2 72 50.0
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 1.3e-09 66.2 110 41.8
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 1.7e-09 65.9 83 49.4
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 1.7e-09 65.9 87 48.3
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 3.9e-09 64.7 83 48.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 3.9e-09 64.7 72 47.2
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 5.1e-09 64.3 58 55.2
AT4G13560 Arabidopsis thaliana HOM05D005842 ORTHO05D007077 5.1e-09 64.3 110 40.0
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 6.6e-09 63.9 87 47.1
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 8.7e-09 63.5 84 46.4
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 8.7e-09 63.5 84 46.4
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 8.7e-09 63.5 87 44.8
C08p07940 Brassica napus HOM05D005842 ORTHO05D007077 1.1e-08 63.2 45 73.3
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 1.5e-08 62.8 89 44.9
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 1.9e-08 62.4 84 45.2
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.5e-08 62.0 85 48.2
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 4.3e-08 61.2 85 48.2
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 4.3e-08 61.2 84 45.2
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 5.6e-08 60.8 123 33.3
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 7.3e-08 60.5 110 39.1
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 7.3e-08 60.5 59 54.2
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 1.6e-07 59.3 89 44.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 1.6e-07 59.3 89 44.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 1.6e-07 59.3 89 44.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 1.6e-07 59.3 89 44.9
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 1.6e-07 59.3 104 37.5
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.6e-07 59.3 110 39.1
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 3.6e-07 58.2 86 44.2
Carub.0007s2898 Capsella rubella HOM05D005842 ORTHO05D007077 4.7e-07 57.8 110 37.3
Sopen12g032850 Solanum pennellii HOM05D005842 ORTHO05D007077 4.7e-07 57.8 82 45.1
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.1e-06 56.6 84 44.0
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 1.1e-06 56.6 79 41.8
Solyc12g097050.2 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.4e-06 56.2 82 43.9
Duzib151G0923 Durio zibethinus HOM05D005842 ORTHO05D007077 1.8e-06 55.8 35 74.3
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 1.8e-06 55.8 140 32.9
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 1.8e-06 55.8 83 45.8
Peaxi162Scf00125g01021 Petunia axillaris HOM05D005842 ORTHO05D007077 4.0e-06 54.7 87 44.8
PGSC0003DMG400008623 Solanum tuberosum HOM05D005842 ORTHO05D007077 6.9e-06 53.9 82 42.7
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 9.0e-06 53.5 73 46.6


User provided reference genes

Program Settings