Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 8.5e-31 136.3 68 100.0
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 3.6e-21 104.4 57 86.0
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 5.2e-20 100.5 57 86.0
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 1.5e-19 99.0 55 83.6
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 1.5e-19 99.0 55 83.6
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 1.5e-19 99.0 58 77.6
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 2.0e-19 98.6 57 80.7
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 3.4e-19 97.8 57 78.9
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 4.4e-19 97.4 55 80.0
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 4.4e-19 97.4 54 81.5
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 4.4e-19 97.4 54 83.3
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 5.7e-19 97.1 54 83.3
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 9.7e-19 96.3 55 80.0
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 1.3e-18 95.9 63 74.6
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 1.3e-18 95.9 57 80.7
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.2e-18 95.1 55 80.0
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 2.2e-18 95.1 56 80.4
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 2.8e-18 94.7 57 77.2
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 2.8e-18 94.7 57 78.9
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 2.8e-18 94.7 57 77.2
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.7e-18 94.4 55 80.0
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 3.7e-18 94.4 55 80.0
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 3.7e-18 94.4 56 78.6
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 3.7e-18 94.4 55 80.0
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 4.8e-18 94.0 55 80.0
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.8e-18 94.0 65 73.8
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.8e-18 94.0 65 73.8
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 8.3e-18 93.2 55 76.4
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 8.3e-18 93.2 55 80.0
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 8.3e-18 93.2 56 76.8
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 8.3e-18 93.2 57 73.7
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 8.3e-18 93.2 57 73.7
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 8.3e-18 93.2 57 73.7
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 1.1e-17 92.8 58 79.3
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 1.4e-17 92.4 52 80.8
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.4e-17 92.4 55 76.4
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.4e-17 92.4 55 76.4
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.8e-17 92.0 61 77.0
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.8e-17 92.0 55 78.2
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 2.4e-17 91.7 63 73.0
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 3.1e-17 91.3 59 71.2
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.1e-17 91.3 55 76.4
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 3.1e-17 91.3 54 77.8
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 4.1e-17 90.9 55 74.5
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 4.1e-17 90.9 55 76.4
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 4.1e-17 90.9 61 68.9
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.3e-17 90.5 55 74.5
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 9.1e-17 89.7 56 73.2
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 1.2e-16 89.4 49 83.7
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.2e-16 89.4 55 74.5
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 1.2e-16 89.4 55 76.4
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.2e-16 89.4 47 87.2
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 2.7e-16 88.2 56 71.4
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 2.7e-16 88.2 55 74.5
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.5e-16 87.4 56 71.4
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 5.9e-16 87.0 57 73.7
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 5.9e-16 87.0 62 74.2
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 5.9e-16 87.0 57 73.7
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 7.7e-16 86.7 49 79.6
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 7.7e-16 86.7 49 79.6
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 7.7e-16 86.7 57 71.9
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 7.7e-16 86.7 52 76.9
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 7.7e-16 86.7 58 74.1
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 3.8e-15 84.3 49 81.6
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 8.5e-15 83.2 57 70.2
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 8.5e-15 83.2 54 74.1
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 1.5e-14 82.4 51 72.5
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.5e-14 82.4 60 65.0
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 4.2e-14 80.9 57 68.4
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 5.5e-14 80.5 47 78.7
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 5.5e-14 80.5 47 78.7
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 7.2e-14 80.1 55 67.3
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 7.2e-14 80.1 55 69.1
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.6e-13 79.0 57 66.7
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.6e-13 79.0 57 66.7
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 4.7e-13 77.4 58 65.5
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 1.7e-10 68.9 56 57.1
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.6e-08 62.4 33 87.9
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 2.0e-08 62.0 56 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 2.7e-08 61.6 43 67.4


User provided reference genes

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