Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.1e-101 370.9 203 100.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-92 343.2 194 96.4
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.5e-91 337.4 194 94.3
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.9e-88 327.8 203 86.2
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.0e-85 317.4 194 89.7
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-71 273.1 194 74.2
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.3e-70 268.9 194 72.2
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.7e-69 265.0 195 68.7
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.1e-68 262.3 194 72.2
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.2e-68 261.5 194 71.1
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.9e-67 257.3 194 77.8
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.1e-65 251.1 206 68.9
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.2e-58 229.6 144 96.5
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-46 190.7 102 87.3
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.4e-44 183.0 195 57.4
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.0e-40 168.3 194 50.0
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.1e-37 159.8 125 63.2
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.3e-30 136.0 191 43.5
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-23 114.0 189 42.3
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 2.5e-22 109.8 177 42.4
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.9e-17 93.6 134 46.3
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 2.3e-15 86.7 114 41.2
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 8.8e-15 84.7 114 41.2
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.1e-14 84.3 121 44.6
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.5e-14 83.2 133 41.4
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 5.7e-14 82.0 114 40.4
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 1.1e-12 77.8 139 39.6
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 1.4e-12 77.4 121 40.5
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 2.4e-12 76.6 103 40.8
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 6.9e-12 75.1 103 39.8
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 6.9e-12 75.1 125 36.0
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 9.1e-12 74.7 114 38.6
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 2.6e-11 73.2 125 32.8
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 5.9e-11 72.0 133 37.6
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 7.7e-11 71.6 99 40.4
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 7.7e-11 71.6 112 41.1
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 7.7e-11 71.6 128 35.9
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 7.7e-11 71.6 133 34.6
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.8e-10 69.3 106 37.7
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 5.0e-10 68.9 116 36.2
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 6.5e-10 68.6 128 37.5
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 6.5e-10 68.6 123 33.3
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 8.5e-10 68.2 131 36.6
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.5e-09 66.6 121 33.9
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 2.5e-09 66.6 113 38.9
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.2e-09 66.2 132 37.1
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.2e-09 66.2 132 36.4
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.2e-09 66.2 124 33.9
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.2e-09 65.9 132 37.1
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 5.5e-09 65.5 122 32.8
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.6e-08 63.9 139 33.8
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.6e-08 63.9 122 35.2
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.1e-08 63.5 159 30.2
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 3.6e-08 62.8 96 38.5
Medtr3g082340 Medicago truncatula HOM05D009148 ORTHO05D011895 3.6e-08 62.8 122 41.0
Medtr3g082420 Medicago truncatula HOM05D009148 ORTHO05D011895 3.6e-08 62.8 122 41.0
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 3.6e-08 62.8 129 32.6
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.7e-08 62.4 122 36.1
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 6.1e-08 62.0 118 33.9
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 6.1e-08 62.0 111 33.3
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 7.9e-08 61.6 109 37.6
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 7.9e-08 61.6 128 35.9
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 7.9e-08 61.6 115 32.2
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.9e-08 61.6 122 36.1
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 7.9e-08 61.6 122 36.1
AT1G50690 Arabidopsis thaliana HOM05D008885 ORTHO05D006152 1.0e-07 61.2 118 37.3
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 1.0e-07 61.2 92 35.9
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 1.0e-07 61.2 92 35.9
arahy.Tifrunner.gnm1.ann1.82LERJ Arachis hypogaea HOM05D010841 ORTHO05D007789 1.4e-07 60.8 109 35.8
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 1.4e-07 60.8 113 35.4
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 1.4e-07 60.8 121 34.7
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.4e-07 60.8 108 34.3
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 1.4e-07 60.8 92 39.1
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 2.3e-07 60.1 117 35.0
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.9e-07 59.3 94 35.1
TPR.G22948 Trifolium pratense HOM05D009148 ORTHO05D011895 5.1e-07 58.9 108 34.3
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 6.7e-07 58.5 130 33.8
CARHR040780 Cardamine hirsuta HOM05D008885 ORTHO05D006152 6.7e-07 58.5 139 30.9
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 6.7e-07 58.5 121 32.2
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 1.1e-06 57.8 130 33.8
arahy.Tifrunner.gnm1.ann1.W55X99 Arachis hypogaea HOM05D010841 ORTHO05D007789 1.1e-06 57.8 118 37.3
Migut.F00817 Erythranthe guttata HOM05D020956 ORTHO05D015643 1.1e-06 57.8 70 37.1
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 1.1e-06 57.8 119 33.6
Dinv01174 Davidia involucrata HOM05D008623 ORTHO05D007789 1.5e-06 57.4 103 36.9
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 107 35.5
AL1G58370 Arabidopsis lyrata HOM05D008885 ORTHO05D006152 2.0e-06 57.0 87 39.1
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.0e-06 57.0 119 32.8
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.6e-06 56.6 139 30.2
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 3.3e-06 56.2 124 38.7
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 3.3e-06 56.2 124 38.7
CARHR040800 Cardamine hirsuta HOM05D008885 ORTHO05D006152 3.3e-06 56.2 131 33.6
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.3e-06 56.2 106 35.8
Migut.O00305 Erythranthe guttata HOM05D020956 ORTHO05D015643 4.4e-06 55.8 96 33.3
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.4e-06 55.8 108 32.4
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 4.4e-06 55.8 120 31.7
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 5.7e-06 55.5 111 32.4
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 7.4e-06 55.1 113 29.2
Rhsim07G0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.4e-06 55.1 117 33.3
AT1G63190 Arabidopsis thaliana HOM05D007210 ORTHO05D006152 9.7e-06 54.7 98 38.8
Dinv23236 Davidia involucrata HOM05D000519 ORTHO05D001210 9.7e-06 54.7 78 39.7
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 9.7e-06 54.7 119 32.8


User provided reference genes

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