Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-179 632.5 297 100.0
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.3e-155 553.1 315 85.1
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 6.3e-155 550.8 315 84.8
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 8.2e-155 550.4 315 84.8
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.6e-153 546.2 315 83.5
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 9.1e-53 211.5 368 35.6
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.9e-52 208.8 369 36.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.3e-51 207.6 369 34.4
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.3e-48 196.8 273 39.2
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 7.0e-45 185.3 362 31.8
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 2.2e-43 180.3 274 40.9
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.2e-41 174.5 216 39.8
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-32 144.1 378 28.6
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.5e-31 141.0 339 31.0
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 2.0e-31 140.6 373 29.0
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 2.0e-28 130.6 382 29.1
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-27 127.5 354 28.5
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.5e-26 124.4 208 31.7
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.9e-26 124.0 367 29.2
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 2.8e-25 120.2 381 27.6
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.0e-24 118.2 224 32.1
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.0e-24 116.3 206 33.5
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.0e-24 116.3 365 26.3
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 5.2e-24 115.9 354 26.8
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 2.6e-23 113.6 217 33.2
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.4e-23 112.8 214 30.8
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.8e-23 111.7 246 30.9
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 1.3e-22 111.3 223 33.6
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-22 111.3 213 34.7
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.7e-22 110.9 193 31.6
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.8e-22 110.2 202 32.7
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 3.7e-22 109.8 220 32.7
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.4e-21 107.8 222 30.2
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-21 107.5 288 30.6
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.4e-21 107.1 218 30.3
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 3.2e-21 106.7 213 31.9
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.2e-21 105.1 341 26.4
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 9.2e-21 105.1 230 28.3
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.7e-20 103.6 222 28.8
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 3.5e-20 103.2 214 28.5
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.5e-20 103.2 290 29.3
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.5e-20 102.8 214 31.8
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 7.8e-20 102.1 185 33.5
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.0e-19 101.7 209 32.1
Hund19676 Selenicereus undatus HOM05D007560 ORTHO05D005947 1.7e-19 100.9 242 28.1
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.3e-19 100.5 208 33.7
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 2.3e-19 100.5 377 26.0
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.3e-19 100.5 156 35.3
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-19 100.1 217 31.8
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.9e-19 100.1 165 37.6
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-19 99.8 215 31.2
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 5.0e-19 99.4 221 32.1
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 5.0e-19 99.4 298 29.2
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.1e-18 98.2 283 27.9
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.1e-17 94.0 216 32.9
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.8e-17 93.6 143 35.0
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.8e-17 93.6 175 33.7
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.6e-17 93.2 209 30.1
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 8.0e-17 92.0 136 40.4
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 1.0e-16 91.7 229 28.8
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 3.4e-15 86.7 114 43.0
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 3.4e-15 86.7 229 27.9
Aqoxy5G01909 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-14 84.0 218 28.9
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 2.9e-14 83.6 227 29.5
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 3.7e-14 83.2 225 28.4
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 4.9e-14 82.8 213 27.2
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 8.3e-14 82.0 211 30.8
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 1.1e-13 81.6 222 32.0
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.9e-13 80.9 192 26.6
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 1.9e-13 80.9 153 32.0
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 3.2e-13 80.1 161 31.7
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.1e-13 79.7 341 22.3
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 6.0e-12 75.9 105 40.0
Nitab4.5_0009688g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-11 74.7 135 31.1
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 3.9e-11 73.2 163 30.7
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-10 71.6 155 29.7
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 2.5e-10 70.5 201 29.4
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 3.3e-10 70.1 45 66.7
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 3.3e-10 70.1 205 29.3
Aqoxy5G01433 Aquilegia oxysepala HOM05D007560 ORTHO05D005947 5.6e-10 69.3 142 33.1
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.6e-10 69.3 95 33.7
Lj4A614G14 Lonicera japonica HOM05D007560 ORTHO05D005947 5.6e-10 69.3 57 56.1
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 5.6e-10 69.3 97 36.1
COL.COLO4_10475 Corchorus olitorius HOM05D023542 ORTHO05D005947 9.5e-10 68.6 214 25.7
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 9.5e-10 68.6 223 30.0
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 1.6e-09 67.8 195 29.2
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.6e-09 66.6 125 30.4
PSO384G1299 Papaver somniferum HOM05D008691 ORTHO05D005947 4.7e-09 66.2 220 26.4
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-08 64.7 45 62.2
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 3.1e-08 63.5 194 28.9
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 5.2e-08 62.8 163 27.0
PGSC0003DMG400017974 Solanum tuberosum HOM05D015457 ORTHO05D020327 1.5e-07 61.2 177 28.2
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 3.4e-07 60.1 79 36.7
Lj5E336G0 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-06 57.8 45 60.0
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 2.9e-06 57.0 56 51.8
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 2.9e-06 57.0 129 30.2
Peaxi162Scf01051g00144 Petunia axillaris HOM05D015457 ORTHO05D020327 4.9e-06 56.2 208 24.0
Thecc.01G188100 Theobroma cacao HOM05D000007 ORTHO05D000521 4.9e-06 56.2 221 23.5
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 8.3e-06 55.5 72 37.5
Sabra02G0170100 Salix brachista HOM05D000007 ORTHO05D000521 8.3e-06 55.5 209 25.4


User provided reference genes

Program Settings