Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 1.5e-68 263.1 164 100.0
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.0e-21 107.5 166 41.6
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 3.4e-17 92.4 165 40.0
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 4.9e-16 88.6 163 39.3
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.7e-14 82.8 169 34.9
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 8.7e-13 77.8 115 40.9
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.3e-12 75.5 127 37.0
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 4.7e-11 72.0 120 38.3
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 8.1e-11 71.2 115 39.1
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 5.2e-10 68.6 181 40.3
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 9.0e-10 67.8 83 48.2
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.2e-09 67.4 178 29.8
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.0e-09 66.6 58 58.6
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 2.6e-09 66.2 170 31.2
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.4e-09 65.5 74 52.7
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 4.4e-09 65.5 68 51.5
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 7.6e-09 64.7 68 51.5
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 7.6e-09 64.7 46 58.7
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 9.9e-09 64.3 80 50.0
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 9.9e-09 64.3 152 31.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 1.3e-08 63.9 69 50.7
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.3e-08 63.9 152 30.9
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-08 63.5 140 35.7
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.2e-08 63.2 79 48.1
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.2e-08 63.2 64 48.4
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 6.4e-08 61.6 158 30.4
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 8.4e-08 61.2 79 46.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.1e-07 60.8 180 28.9
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-07 60.8 68 50.0
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.4e-07 60.5 86 40.7
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.4e-07 60.5 79 46.8
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.4e-07 60.5 86 40.7
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 1.4e-07 60.5 68 51.5
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 1.4e-07 60.5 113 47.8
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.9e-07 60.1 68 50.0
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.4e-07 59.7 70 50.0
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.4e-07 59.7 133 43.6
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 2.4e-07 59.7 157 31.2
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 2.4e-07 59.7 67 50.7
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 3.2e-07 59.3 68 47.1
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.2e-07 59.3 82 41.5
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 5.4e-07 58.5 37 67.6
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.4e-07 58.5 85 40.0
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 7.1e-07 58.2 75 41.3
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 7.1e-07 58.2 82 41.5
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 1.6e-06 57.0 55 50.9
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.6e-06 57.0 54 50.0
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 1.6e-06 57.0 82 43.9
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 2.1e-06 56.6 93 38.7
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 2.1e-06 56.6 37 70.3
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 2.1e-06 56.6 56 51.8
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.5e-06 55.8 65 44.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 4.6e-06 55.5 71 47.9
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 4.6e-06 55.5 56 51.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.0e-06 55.1 74 44.6
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 6.0e-06 55.1 35 71.4
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.8e-06 54.7 40 70.0
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 7.8e-06 54.7 59 54.2


User provided reference genes

Program Settings