Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 4.8e-107 391.3 223 100.0
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 2.6e-105 385.6 223 98.7
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.4e-45 187.2 230 53.0
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 5.2e-45 185.3 214 56.5
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.7e-43 180.3 233 50.6
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 8.4e-43 177.9 243 51.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 8.4e-43 177.9 226 51.3
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 8.4e-43 177.9 226 51.3
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 1.9e-42 176.8 201 54.2
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 7.1e-42 174.9 226 50.9
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 6.0e-41 171.8 227 49.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 1.0e-40 171.0 229 49.8
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 6.6e-40 168.3 266 46.2
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.5e-39 167.2 222 53.2
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 2.5e-39 166.4 227 51.5
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 3.3e-39 166.0 230 50.0
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 9.6e-39 164.5 240 45.8
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 9.6e-39 164.5 240 45.8
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 4.7e-38 162.2 233 49.8
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 4.7e-38 162.2 256 46.1
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.1e-37 161.0 244 47.5
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 1.4e-37 160.6 228 49.1
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 3.1e-37 159.5 234 47.4
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 5.2e-37 158.7 247 44.1
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 1.2e-36 157.5 222 50.0
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 2.6e-36 156.4 215 49.3
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 3.4e-36 156.0 232 52.6
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 2.2e-35 153.3 233 47.6
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 2.2e-35 153.3 251 45.4
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 2.2e-35 153.3 244 46.7
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.2e-35 153.3 200 51.0
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 3.8e-35 152.5 209 49.3
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 4.9e-35 152.1 226 53.5
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 1.1e-34 151.0 209 49.8
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 1.4e-34 150.6 239 46.9
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.9e-34 150.2 220 49.1
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 1.9e-34 150.2 246 45.5
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 1.9e-34 150.2 230 46.5
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 2.4e-34 149.8 204 47.5
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 3.2e-34 149.4 219 51.1
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 3.2e-34 149.4 259 43.2
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 4.2e-34 149.1 219 50.7
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 9.3e-34 147.9 230 45.2
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 2.7e-33 146.4 182 54.4
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 3.5e-33 146.0 242 41.7
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 2.3e-32 143.3 227 48.9
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 2.3e-32 143.3 256 41.4
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 1.5e-31 140.6 233 42.9
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 4.3e-31 139.0 247 44.1
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 1.6e-30 137.1 195 48.7
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 8.1e-30 134.8 236 45.3
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 1.8e-29 133.7 256 42.6
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 2.4e-29 133.3 218 50.0
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 4.0e-29 132.5 228 44.3
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 9.0e-29 131.3 258 42.6
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 2.0e-28 130.2 250 42.0
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 2.6e-28 129.8 279 37.3
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.1e-26 124.4 238 41.6
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 2.4e-26 123.2 246 40.2
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 3.2e-26 122.9 267 38.6
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 4.2e-26 122.5 216 43.1
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 4.2e-26 122.5 219 42.5
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 5.4e-26 122.1 217 44.7
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 1.2e-25 120.9 142 57.7
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 1.6e-25 120.6 264 37.5
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 3.5e-25 119.4 233 44.2
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.8e-24 117.1 227 40.5
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 3.0e-24 116.3 280 36.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 3.9e-24 115.9 141 55.3
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.5e-23 114.0 169 51.5
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 3.1e-21 106.3 146 52.1
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 6.9e-21 105.1 231 41.6
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 2.0e-20 103.6 204 41.2
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 2.6e-20 103.2 242 40.9
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 5.8e-20 102.1 233 36.5
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 9.9e-20 101.3 214 37.4
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 9.9e-20 101.3 146 51.4
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 1.9e-18 97.1 242 38.4
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 1.2e-17 94.4 140 58.6
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 6.0e-17 92.0 224 39.3
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 3.0e-16 89.7 126 50.0
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 3.0e-16 89.7 207 40.6
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.5e-15 87.4 226 35.0
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 3.7e-14 82.8 183 41.0
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 3.7e-14 82.8 216 35.2
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 6.2e-14 82.0 268 33.2
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 6.2e-14 82.0 226 36.7
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 3.1e-13 79.7 241 34.0
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 6.9e-13 78.6 161 42.2
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 6.9e-13 78.6 161 42.2
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 9.0e-13 78.2 196 36.7
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 1.2e-12 77.8 118 47.5
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 1.7e-11 73.9 239 33.5
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.2e-11 73.6 225 33.3
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 2.9e-11 73.2 108 55.6
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 3.8e-11 72.8 128 41.4
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 3.8e-11 72.8 128 41.4
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 2.5e-10 70.1 279 27.2
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 4.2e-10 69.3 199 32.7
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.0e-08 63.2 101 42.6
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 1.1e-07 61.2 207 32.4
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 2.5e-07 60.1 209 31.6
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 4.3e-07 59.3 218 30.7
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 4.3e-07 59.3 45 68.9
Gohir.A05G257100 Gossypium hirsutum HOM05D002661 ORTHO05D002786 5.7e-07 58.9 210 31.9
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 9.6e-07 58.2 210 31.0
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 1.3e-06 57.8 210 30.5
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.8e-06 56.6 211 29.4
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 3.7e-06 56.2 212 28.3
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 4.8e-06 55.8 102 40.2
Zm00001eb391910 Zea mays HOM05D036147 ORTHO05D008751 4.8e-06 55.8 219 30.6
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 6.3e-06 55.5 202 29.7
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 8.2e-06 55.1 209 32.1
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 8.2e-06 55.1 210 27.6


User provided reference genes

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