Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006203 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 3.9e-44 181.4 116 100.0
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 4.2e-14 81.6 98 56.1
Actinidia16886 Actinidia chinensis HOM05D009264 ORTHO05D009202 1.0e-12 77.0 120 53.3
CSS0022072 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 2.2e-10 69.3 121 45.5
CSS0039740 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 2.2e-10 69.3 120 44.2
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 3.1e-09 65.5 80 56.2
RcHm_v2.0_Chr3g0457921 Rosa chinensis HOM05D009264 ORTHO05D009202 3.5e-08 62.0 134 48.5
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 1.3e-07 60.1 124 45.2
PGR083G1195 Punica granatum HOM05D009264 ORTHO05D009202 1.3e-07 60.1 117 48.7
Oeu016555.1 Olea europaea HOM05D038384 ORTHO05D009202 2.3e-07 59.3 67 49.3
Glyma.03G229500 Glycine max HOM05D011874 ORTHO05D009202 5.0e-07 58.2 78 48.7
Glyma.19G226800 Glycine max HOM05D011874 ORTHO05D009202 6.6e-07 57.8 80 47.5
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 6.6e-07 57.8 88 39.8
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 6.6e-07 57.8 84 47.6
Haze_04025 Corylus avellana HOM05D009264 ORTHO05D009202 8.6e-07 57.4 98 51.0
Oeu016561.1 Olea europaea HOM05D038384 ORTHO05D009202 8.6e-07 57.4 67 47.8
TAR633G2549 Trochodendron aralioides HOM05D009264 ORTHO05D009202 1.1e-06 57.0 76 53.9
Gohir.D11G112000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 1.9e-06 56.2 129 39.5
CiPaw.07G033300 Carya illinoinensis HOM05D009264 ORTHO05D009202 2.5e-06 55.8 130 43.8
Potri.005G006000 Populus trichocarpa HOM05D014622 ORTHO05D009202 3.3e-06 55.5 100 38.0
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 4.2e-06 55.1 106 50.0
Hma1.2p1_0052F.1_g030560 Hydrangea macrophylla HOM05D009264 ORTHO05D009202 4.2e-06 55.1 73 52.1
Medtr7g111770 Medicago truncatula HOM05D011874 ORTHO05D009202 4.2e-06 55.1 70 48.6
SalBow7G0413 Salvia bowleyana HOM05D009264 ORTHO05D009202 4.2e-06 55.1 118 37.3
Duzib128G1262 Durio zibethinus HOM05D021022 ORTHO05D009202 5.5e-06 54.7 122 42.6
QL03p008780 Quercus lobata HOM05D009264 ORTHO05D009202 7.2e-06 54.3 61 52.5
QL03p013046 Quercus lobata HOM05D009264 ORTHO05D009202 7.2e-06 54.3 61 52.5
Potri.013G005300 Populus trichocarpa HOM05D014622 ORTHO05D009202 9.5e-06 53.9 127 42.5


User provided reference genes

Program Settings